LOCUS LJ618375 1350 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65902.graph_c2_seq4.
ACCESSION LJ618375
VERSION LJ618375.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1350)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1350
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65902.graph_c2_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 489 a 174 c 154 g 533 t
ORIGIN
1 tacattccct ggatagaaag aacggcgtgg ccagaaaatt tttaatttac acgacacttc
61 aatttgttca tagtttgaaa agaaactcag caaatggaaa taaatctaac taaattaaaa
121 agtgcatatt acttatgtta attcgcgttt taaagtctac aaatattttt gaatttaaat
181 gaattcaaat tgattaaaat atgaaatgcg ttatttatca ttttgaattc ggatgtactc
241 atgtctccat tatttttaga ttaaagtaaa tggaaacgta aaataaacta ttcattattt
301 tgaattcgtg tgaatccacg tttccattat attatttttc aatttattga aatacgagaa
361 atgatctttt atcatgtcaa atttatatta tttttggatt caaacaaatt tgaaaaatct
421 gaagcacata ttcgaaaatg tcagaataaa tttatttcta tctatttcaa ttcattattt
481 ttgtttgctg ggaaactttt ttattgaaaa tccgatttta ttggtatatg accacatctt
541 atcaatttat ataaaaaata aaagaaaact aaagctagtt gttgtttcgt ggacattctt
601 agttctgttt gcctgctgct cttaatatct acttatattg tgacattcat tgatttcttg
661 ccagtgcatt taattctttt tttacttcat catcggatat tttcagtata aaaattctaa
721 aagcaattac taccaaaata caaaaagtaa aatctagcat ataaatctgt gcaaccacga
781 acattgattt tccttttgta catggcactc aatgaagctt tgtagtaagg aggtactaca
841 cagaattctc atagaaaact attttaaata ccatagtaag ttactgtatt actatgtatc
901 agtatcgaga tatacaatat agatataagg caaataatct atgtaagatc ttttatgacc
961 tttttataat cttataagtt attttttata ttaattctat acacttcata cattaatata
1021 tgtatttaac ttgtgcagtt aatagtgaat tcattaatac cttcgtagag acatagtaag
1081 taaaggtcac tcgaatattt cttacatata taatgcacgt tattattctt attacaacat
1141 tctattttgt attcacttat tgtattaaca taaagtttaa cataaatttt ttttctttta
1201 ccaattctat attatttcat agtacatttt caacttttgt ttaattaaag ttatatctgt
1261 atgaaataat tattagtata gaaaaaaaca tttaattata tattttgctc atgttcaata
1321 ataatggatt acaaaataaa aaaaaaaaaa
//