LOCUS LJ618373 3489 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65902.graph_c2_seq2.
ACCESSION LJ618373
VERSION LJ618373.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3489)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3489
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65902.graph_c2_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1250 a 542 c 463 g 1234 t
ORIGIN
1 tatacatatt atgtttgaaa atattggaaa atcaatgaga atttttttta cttaatctag
61 gaagattatg cagataatca gaaacaggaa agattaaaat cagtaaatat aaatcagaag
121 attcaagaat tatcaggatt cctgaaaaca cttgaaatta caaaatcttt cgaaatattg
181 acgccaaaat ctaaacaaaa atatcttcaa actgaaattg aaaaggtaca atctccatta
241 ttttatttca aagtttatta ataaaattaa aattacttat ttatttcata gctctcgcat
301 tttcaaaagg aagtaaataa tctaaaaaga tataatgaaa ttatatcagc tccaataaat
361 tcttcaaata attcatttta atgttttttt ttatttgatt ttattttttg tcaagatttt
421 aaaattagga aaaactcgat atcagtctct tgaagtattt atttaaataa aacttatgtg
481 tattacaata ttaatttcat gcagagtttt cataacatat gtcaagataa tcggaaagga
541 aatatttttc atgcatagta aaaaaaatta acaattaaaa ttctatagat atatcagata
601 catatcaaat attgttagat atgtacagaa agtaaataat caatgataaa atgagataaa
661 gttaggaaag atagattttt ctaagatatg tgtaagagtt gttaaaataa tttcgttaaa
721 aaaatgtcct ttccagtttt cttgccagtg cattcgattc ttgtttttac ttcatcatcg
781 gatattttca gtataaaaat tctaaaagca attactacca aaatacaaaa agtaaaatct
841 agcatataaa tctgtgcaac cacgaacatt gattttcctt ttgtacatgg cactcaatga
901 agctttgtag taaggaggta ctacacagaa ttctcataga aaactatttt aaataccata
961 gtaagttact gtattactat gtatcagtat cgagatatac aatatagata taaggcaaat
1021 aatctatata aggtttttta tgaccttttc ataatcttac aagttatttg ttgtattaat
1081 tctatatact tcatacatta atacatgtat ttaatttgtg cagttaatgg tgaatttgtt
1141 cataccttca cagaaacata ataagtaata tcactcaaat atttcttaca tataaaatgc
1201 acgttattgt tctcattaca ttacgtttcc aacgttttgt attcactcat tgtacaatat
1261 taacataaaa tttaacataa aaattttttt ctcttaccaa ttaatataca ttctacatta
1321 tttcatagtg cattttcaac ttttgtttaa ttaaagtaat atttgtatgg aataattaat
1381 gtagaaaaga acatttaatt atatattttg cttatgtcca ataataatgg attacaaagt
1441 aattttttta tgcaaatgtt ttacatatca catttcgtag tttcattcat tacataagat
1501 attatatacg tatatacata aaaatcaact ctagagccaa tcgagataat tcaaaataaa
1561 aactatgtat gtgaatttat atacatacac ataaaaccta ggtaaatctt actgctgaaa
1621 atttcaatat atattacaag tttgtaattg agcagtaaac actacaaaat ctagtcatac
1681 ataatataca tctaattatc atatatagat tagaactaca tatttaatat ctaaatcata
1741 atttttcaca ctcatttctt acattcgttt aaaagaaagt tttaaaacgc ttaaaagaaa
1801 gtgcgcttca aaactgtatt cagtcattct tatgtatcat tttgataaga aaatacttta
1861 ataaatttga aaatttaacg atttattaat gaacacactg gcatttcatc acacatatat
1921 taagaattta atatatgtac catgtttaag aattccaacc agatttaaac caatttagta
1981 ttacaaagct atatggtata tgccacaata atattacata tagcagtaat atcatgtacg
2041 tataattgtt aataaagtaa tgattgtaat ttatgttata ctaaaagacg attgatttga
2101 ttattaatct ctgatctgat tattaatcta tttttaacaa aaaaattgtt gatagaaatt
2161 aacagattaa aaattaatag taattatgtg ttatatatac acatgtatac acttgtatca
2221 aatacattta aagacctcga tattaagtaa cattatttct aatatgtttc gaatatatta
2281 gagataatgt tacagatgtt ttcgatcggc tattttcaaa aaagtccact tttaacttgt
2341 cgcattggca tgtttatatt ttttaaaatc ttgattaaag gcgtcagttt tattactagc
2401 ttctgcgttt tgagggctat cctaagaaat catcgttttc ctaggagatg gtccaagcaa
2461 gtatactttg ttgacgagga tcattggagc attgattctc tgttagaaac ttctacacat
2521 agttttaatt tcaggatatt cctcgtgtgc cggatttaaa tcaacgaaac ctagtttgcc
2581 ataaaattcg tgagattcct tatccgttga taacatcgtc gtgtgcactc cgaaagaacc
2641 atttgctctt aaagctgcaa gaacgcaggt tattaaacgt ttacaaatag actgatctgt
2701 cacacttgat agtacagtgc atacaagttt cgacggatgc tgtctgcaca attgttccga
2761 cacgtccgga ataaatgaat ggaaatattg tatggcatct tgaacatttt gtggcaactc
2821 gctaatacta ttatctaagg gatatttcat tcgtaattca ggaatccagg aaacagccat
2881 tttctgattg tgagatttta tattcagtgt agccaatgcg taacctgcta taccattttc
2941 atcctcaaca accatacata actctggact caatgttaga aatcctccga taagtttgtc
3001 tgctacagct gacgaagttg tacagttatt aacttgattg cataccgcat aaaccgcttc
3061 ttcatcactc ggtacatacg gtcgaattgt atatatttta ctactgggca cttccggtgc
3121 tttatagacg aataagtcgt tgccactgtc aactgggatt aatctctgta aatcagccgt
3181 aagtccacca cggaaaaccc agggttcctg ttctccactc ataaatgttt ctttccaacc
3241 atttgaaaac catgtgtagc tgccctgggt aaacgtcgtc atcgtcgctg ggaatctgcc
3301 aaacgccagc cacttcacgt aactatttag aagagacaca actcccctca tatcccatac
3361 atacgcatac agatcgtata gcaactcgcg attattacag tatgtgagcc tttggaataa
3421 tctatttacc ccattacaca tgtcgtttaa tttagctgca cgaagatgcc attcttcaat
3481 gtctgatgc
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