LOCUS LJ618372 3610 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65902.graph_c2_seq1.
ACCESSION LJ618372
VERSION LJ618372.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3610)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3610
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65902.graph_c2_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1307 a 562 c 490 g 1251 t
ORIGIN
1 gtaaacaata cacatgaatt gttatataat atgcagggat atagatacta taaaagaatg
61 gagacgtgac aaacgaagtt tcaataaaag catggagaaa atatcgagac gaaatgaaga
121 tattccattt gcaatcgata ttgaagatta ccctgcaata cgaaaacgtt cacaaaaagt
181 ggaagattat gcagataatc agaaacagga aagattaaaa tcagtaaata taaatcagaa
241 gattcaagaa ttatcaggat tcctgaaaac acttgaaatt acaaaatctt tcgaaatatt
301 gacgccaaaa tctaaacaaa aatatcttca aactgaaatt gaaaaggtac aatctccatt
361 attttatttc aaagtttatt aataaaatta aaattactta tttatttcat agctctcgca
421 ttttcaaaag gaagtaaata atctaaaaag atataatgaa attatatcag ctccaataaa
481 ttcttcaaat aattcatttt aatgtttttt tttatttgat tttatttttt gtcaagattt
541 taaaattagg aaaaactcga tatcagtctc ttgaagtatt tatttaaata aaacttatgt
601 gtattacaat attaatttca tgcagagttt tcataacata tgtcaagata atcggaaagg
661 aaatattttt catgcatagt aaaaaaaatt aacaattaaa attctataga tatatcagat
721 acatatcaaa tattgttaga tatgtacaga aagtaaataa tcaatgataa aatgagataa
781 agttaggaaa gatagatttt tctaagatat gtgtaagagt tgttaaaata atttcgttaa
841 aaaaatgtcc tttccagttt tcttgccagt gcattcgatt cttgttttta cttcatcatc
901 ggatattttc agtataaaaa ttctaaaagc aattactacc aaaatacaaa aagtaaaatc
961 tagcatataa atctgtgcaa ccacgaacat tgattttcct tttgtacatg gcactcaatg
1021 aagctttgta gtaaggaggt actacacaga attctcatag aaaactattt taaataccat
1081 agtaagttac tgtattacta tgtatcagta tcgagatata caatatagat ataaggcaaa
1141 taatctatat aaggtttttt atgacctttt cataatctta caagttattt gttgtattaa
1201 ttctatatac ttcatacatt aatacatgta tttaatttgt gcagttaatg gtgaatttgt
1261 tcataccttc acagaaacat aataagtaat atcactcaaa tatttcttac atataaaatg
1321 cacgttattg ttctcattac attacgtttc caacgttttg tattcactca ttgtacaata
1381 ttaacataaa atttaacata aaaatttttt tctcttacca attaatatac attctacatt
1441 atttcatagt gcattttcaa cttttgttta attaaagtaa tatttgtatg gaataattaa
1501 tgtagaaaag aacatttaat tatatatttt gcttatgtcc aataataatg gattacaaag
1561 taattttttt atgcaaatgt tttacatatc acatttcgta gtttcattca ttacataaga
1621 tattatatac gtatatacat aaaaatcaac tctagagcca atcgagataa ttcaaaataa
1681 aaactatgta tgtgaattta tatacataca cataaaacct aggtaaatct tactgctgaa
1741 aatttcaata tatattacaa gtttgtaatt gagcagtaaa cactacaaaa tctagtcata
1801 cataatatac atctaattat catatataga ttagaactac atatttaata tctaaatcat
1861 aatttttcac actcatttct tacattcgtt taaaagaaag ttttaaaacg cttaaaagaa
1921 agtgcgcttc aaaactgtat tcagtcattc ttatgtatca ttttgataag aaaatacttt
1981 aataaatttg aaaatttaac gatttattaa tgaacacact ggcatttcat cacacatata
2041 ttaagaattt aatatatgta ccatgtttaa gaattccaac cagatttaaa ccaatttagt
2101 attacaaagc tatatggtat atgccacaat aatattacat atagcagtaa tatcatgtac
2161 gtataattgt taataaagta atgattgtaa tttatgttat actaaaagac gattgatttg
2221 attattaatc tctgatctga ttattaatct atttttaaca aaaaaattgt tgatagaaat
2281 taacagatta aaaattaata gtaattatgt gttatatata cacatgtata cacttgtatc
2341 aaatacattt aaagacctcg atattaagta acattatttc taatatgttt cgaatatatt
2401 agagataatg ttacagatgt tttcgatcgg ctattttcaa aaaagtccac ttttaacttg
2461 tcgcattggc atgtttatat tttttaaaat cttgattaaa ggcgtcagtt ttattactag
2521 cttctgcgtt ttgagggcta tcctaagaaa tcatcgtttt cctaggagat ggtccaagca
2581 agtatacttt gttgacgagg atcattggag cattgattct ctgttagaaa cttctacaca
2641 tagttttaat ttcaggatat tcctcgtgtg ccggatttaa atcaacgaaa cctagtttgc
2701 cataaaattc gtgagattcc ttatccgttg ataacatcgt cgtgtgcact ccgaaagaac
2761 catttgctct taaagctgca agaacgcagg ttattaaacg tttacaaata gactgatctg
2821 tcacacttga tagtacagtg catacaagtt tcgacggatg ctgtctgcac aattgttccg
2881 acacgtccgg aataaatgaa tggaaatatt gtatggcatc ttgaacattt tgtggcaact
2941 cgctaatact attatctaag ggatatttca ttcgtaattc aggaatccag gaaacagcca
3001 ttttctgatt gtgagatttt atattcagtg tagccaatgc gtaacctgct ataccatttt
3061 catcctcaac aaccatacat aactctggac tcaatgttag aaatcctccg ataagtttgt
3121 ctgctacagc tgacgaagtt gtacagttat taacttgatt gcataccgca taaaccgctt
3181 cttcatcact cggtacatac ggtcgaattg tatatatttt actactgggc acttccggtg
3241 ctttatagac gaataagtcg ttgccactgt caactgggat taatctctgt aaatcagccg
3301 taagtccacc acggaaaacc cagggttcct gttctccact cataaatgtt tctttccaac
3361 catttgaaaa ccatgtgtag ctgccctggg taaacgtcgt catcgtcgct gggaatctgc
3421 caaacgccag ccacttcacg taactattta gaagagacac aactcccctc atatcccata
3481 catacgcata cagatcgtat agcaactcgc gattattaca gtatgtgagc ctttggaata
3541 atctatttac cccattacac atgtcgttta atttagctgc acgaagatgc cattcttcaa
3601 tgtctgatgc
//