LOCUS LJ617742 1039 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65308.graph_c1_seq29.
ACCESSION LJ617742
VERSION LJ617742.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1039)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1039
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65308.graph_c1_seq29"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 378 a 182 c 252 g 227 t
ORIGIN
1 agaagaagaa gaagaagaag aagacgagga ggaagattat gaattggaaa catcagaagg
61 caaacgtgtt tccagagtaa atgaatatgg tggacaaata aaagataaag atgaacaaga
121 agatgaagaa atagaagatg aggaaatcga aaatattgac gattcagaat taatagctaa
181 acttgaagca aaatatggaa aattatccac tctacaagat agtgaagctg atgaagaaga
241 agaagatgag gaggaagagg aagaggaaga agaggaggaa ggatcgtcca attatgagga
301 ggatggaata gaattttatg aagacgctgg agagggcggc gtttttcgta tgtttccctc
361 ttccgaacgc gatggtggta atgttgtaat gatacaacac aacattgaaa atcaggacat
421 cgcgaatacg tcaacgccgg ttaatacgcg acctagtctt ccatggaata ccacattccc
481 gttaccatta ggcatcagta ctcacccact gttaatatcg caaggaagtt tggatacagc
541 aagtactaga acacaacgtg ctctgcgaca cagacggtat caatacctcc aattatccaa
601 tccacgtagt tcaaatccgc ctgtaatatt acaaagactc ttaggcccag ctgcccagac
661 ccttcctttg tccgccagtc aagttttggc atcgagtttt agagacacgc gtgtagttgt
721 aatggataat ggattgggaa tattcactaa ccaagaagag gagcaaatcg attatgtcga
781 tcagtctggc tatctctttg gtccgagcct tgccgcaact ttgaataata taccaaccgc
841 gttgcactgg tggatcgaag agagcaagca gttggacgga gattctcaac cagattgttg
901 cgttggtgtt gtccacaagt tggtacctgg actagaaaaa cacaggaatg ccgagcttgc
961 cgagcgcaag gagaaacgta aaaaacaaca tggatctgag aaggaaagtg aaaaggataa
1021 taaaaaaaaa aaaaaaaaa
//