LOCUS LJ617736 2972 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65308.graph_c1_seq23.
ACCESSION LJ617736
VERSION LJ617736.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2972)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2972
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65308.graph_c1_seq23"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 996 a 534 c 632 g 810 t
ORIGIN
1 tttttttttt tttttttttc cacacacgtt gtagatacat attattcgca attcacaagc
61 aattcgatcc ggcagtcgag gatctcgact cgacacgagc aatcgcaccc acacatacaa
121 gcatacacgc gtacgagtca acggattcga aaatgagaca atgaaaaaaa gagatattaa
181 attaaattaa attaaagaag aaattatgcg ctacagaaat caatcgtaac agatcacact
241 tttttttttt tcgtaatgaa ttcatcgttc atcaaacatt cgaattcgaa acaacgaata
301 ccgcattcct ggcatgcgca gcttggcacc cgaggctctc ccagaggggg agaagtagta
361 ctttcgttcg ctcgcgacga ttcgcgaatt tgaatcttgt aattcgagag agagagagag
421 agagtcgggg ggcgtttggg ttcatcgacc tccccccaaa gggccaaggc gaggtgtgcc
481 aggagtgcgg gctgattgac gcgctatacc atactgttgt tgaaggattc acccgtcgaa
541 ggaccacaaa acaaaatgtg acggaaaatg aagcaggtca ggtttctctc gacacacctg
601 tttcgaggtg tgcgccggta aagaggaata tcaataatcg cgatacttta cttttgagag
661 caacaggtta catcttcggc acatactttt cgccatcttg cttatctcgc ggcggttcga
721 ttaatcttag tggctcattt ttctttagtc ggtgtttttt ttccgtttta ttaattgcgc
781 gctagttata ctagaacatt attgcgagtt caaacgagag attaatgagt atataaacga
841 acaaaaaatc agccgcgaaa tctaactcgg ctgaacattt gatcgctcgt tcattaggtt
901 tttttaagtt tacaatgacg gatcgatcga tcgaaatgat tgatcgccga gtatttataa
961 atgctctaat aacttaagtt cggttctatg tatgtttcgg ttaaaaaata ttatccttgt
1021 taaattaaga gtacatttaa tgagtacgtt ttaaagagct tgttaaatta aaaaaaaacg
1081 tttgtgtgcg tttatttgta ttctctgtag cctcttaaaa ttttaaaact gttattagac
1141 ggacgtaatc ataacatatt cacacatgaa gaaatttgtt tcaaattctc tgtcttaaga
1201 atttgaagat ttttttttat ttattataaa tgaattttat atattaccga tatttaatat
1261 aatgtgaatt gaatttatat tttaatccgt cactgtacgc gtaaaattgt cgaccatctc
1321 ggactctaat atttctgtta acgcacttta aggaaaaaaa aaaatatata gagacatatc
1381 ttcaataaaa tgtagatcta aaattaacgt atcattataa tttatcttgt taatttctct
1441 tcaggacacc cttagaacgc aagtcggggt tctacgaaaa aaaaaaagaa ttcctgaagg
1501 gagcacacaa agatagtttc gaggaaaaag ggggaagaac ccgaaaccgc gtacacagtc
1561 tgcatccgtg atcacggaga ctatgattac ataaagtaag cttgaaacaa tcgcgaacgt
1621 ctcatcttaa acaaagtgga taacacgaaa gcatcgaaaa gtagtagtaa caatatactg
1681 gtcatggcca cattcgggac aagatgaaat cacaccaaaa cattaaaaga aattaacggc
1741 atacacggag aatcgcaagc gattcttcat catcgaccga caccgtaatg tgtttagacg
1801 ggtacgaagg tataagaggg ggggagggga gggggttact aaactcatat ataaattggc
1861 gagattcagt cttcgtgtaa aaaagaatag ctcctataat attacgatat ttatgtttgc
1921 gattaattaa aatgtttatt tatatatcac agcactcatc agcgttcatc gtatgaagaa
1981 gagaagaaga agtagaagaa gaagaagaag aagaagggga agaagatgaa gaaatcgaaa
2041 atgttgatga ttcagaatta atagctaaac ttgaagcaaa atatggaaaa ttatccactc
2101 tacaagatag tgaagctgat gaagaagaag aagatgagga ggaagaggaa gaggaagaag
2161 aggaggaagg atcgtccaat tatgaggagg atggaataga attttatgaa gacgctggag
2221 agggcggcgt ttttcgtatg tttccctctt ccgaacgcga tggtggtaat gttgtaatga
2281 tacaacacaa cattgaaaat caggacatcg cgaatacgtc aacgccggtt aatacgcgac
2341 ctagtcttcc atggaatacc acattcccgt taccattagg tctgtttgaa gagccccctg
2401 caggttctga gaacaacggc atcagtactc acccactgtt aatatcgcaa ggaagtttgg
2461 atacagcaag tactagaaca caacgtgctc tgcgacacag acggtatcaa tacctccaat
2521 tatccaatcc acgtagttca aatccgcctg taatattaca aaggtatata ctcttaggcc
2581 cagctgccca gacccttcct ttgtccgcca gtcaagtttt ggcatcgagt tttagagaca
2641 cgcgtgtagt tgtaatggat aatggattgg gaatattcac taaccaagaa gaggagcaaa
2701 tcgattatgt cgatcagtct ggctatctct ttggtccgag ccttgccgca actttgaata
2761 atataccaac cgcgttgcac tggtggatcg aagagagcaa gcagttggac ggagattctc
2821 aaccagattg ttgcgttggt gttgtccaca agttggtacc tggactagaa aaacacagga
2881 atgccgagct tgccgagcgc aaggagaaac gtaaaaaaca acatggatct gagaaggaaa
2941 gtgaaaagga taataaaaaa aaaaaaaaaa aa
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