LOCUS LJ617728 1546 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65308.graph_c1_seq15.
ACCESSION LJ617728
VERSION LJ617728.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1546)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1546
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65308.graph_c1_seq15"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 491 a 328 c 393 g 334 t
ORIGIN
1 ttgtccatca aatatgtcac atactcaact gagagcctcc ttgagggccc atcaatataa
61 caacgtcaat tacattgtca gaataatgct gagaaagggt ataatcaccg atctggccaa
121 aataccgcac agtctcgatt tatcgagtcc gaacatggcc ggcactatta acgctgcgtt
181 gaaaccgcta gagactttgt cgcgcattat caatcaaccg atgccaggtg cggtcaataa
241 caagtttacg aagccgaaaa atagaactgt ccaggaagaa ccgattggag aacagacggg
301 cactacgacc tctgaagcta cacatgctgt gggcgaggaa gcgaacgagg acgcagagaa
361 cactgaacac gatatctctg tgactgcaga aagcttggaa ccaacttcgg agagccaggt
421 acacgaagaa ggagacgagg ctgcactgga ggatattatg gatcaacttc tcgaaaggga
481 tgtttcggcc gtggcggaag agcaatcttc tcgcgcgcac aggccaatgg acattgatga
541 tgaaagtctc gcgatgcgcg acgcagaggg cgattttgat ccgactcgag atactacaga
601 ggacttaatg agctccgact ctgactccga tagcaatcca tccgatgata atgaggacga
661 ggtgcaggat gatgaggacg aagaggagga agaggaagat gatggtgaag aaaatgaaga
721 ggaagaggaa gaagaggagg aaggatcgtc caattatgag gaggatggaa tagaatttta
781 tgaagacgct ggagagggcg gcgtttttcg tatgtttccc tcttccgaac gcgatggtgg
841 taatgttgta atgatacaac acaacattga aaatcaggac atcgcgaata cgtcaacgcc
901 ggttaatacg cgacctagtc ttccatggaa taccacattc ccgttaccat taggtctgtt
961 tgaagagccc cctgcaggtt ctgagaacaa cggcatcagt actcacccac tgttaatatc
1021 gcaaggaagt ttggatacag caagtactag aacacaacgt gctctgcgac acagacggta
1081 tcaatacctc caattatcca atccacgtag ttcaaatccg cctgtaatat tacaaaggta
1141 tatactctta ggcccagctg cccagaccct tcctttgtcc gccagtcaag ttttggcatc
1201 gagttttaga gacacgcgtg tagttgtaat ggataatgga ttgggaatat tcactaacca
1261 agaagaggag caaatcgatt atgtcgatca gtctggctat ctctttggtc cgagccttgc
1321 cgcaactttg aataatatac caaccgcgtt gcactggtgg atcgaagaga gcaagcagtt
1381 ggacggagat tctcaaccag attgttgcgt tggtgttgtc cacaagttgg tacctggact
1441 agaaaaacac aggaatgccg agcttgccga gcgcaaggag aaacgtaaaa aacaacatgg
1501 atctgagaag gaaagtgaaa aggataataa aaaaaaaaaa aaaaaa
//