LOCUS LJ617727 2070 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65308.graph_c1_seq14.
ACCESSION LJ617727
VERSION LJ617727.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2070)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2070
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65308.graph_c1_seq14"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 629 a 429 c 430 g 582 t
ORIGIN
1 tctctctctc tctctctctc gattccccag tcgaggataa tacactcata cacacaagca
61 cacattcata cacgcgtacg agtctcaacg gagaaatttg gaaataaaat aagaaaaaag
121 aaaaaaaaat cgctacggat ttcacgtttt ccgtgtcgaa ttattcattg ttcatcgtac
181 attcgagaat taagacaaaa cgcaccgcat tctcggcgca cgcttagcgc taaacgtata
241 gttttctttt ctttcgttcg ttttaatcga acaatccgcg cttttgctga agagtcttgt
301 acatgattcg attggaggat cgggttatat atataatcat atttagcgct aaaataaaaa
361 cgtgccgcca aaacgcggtt cgctagatga tacgcgctat accatactgt tgttgaagga
421 ttcacccgtc gaaggaccac aaaacaaaat gtgacggaaa atgaagcagg tcaggtttct
481 ctcgacacac ctgtttcgag gtgtgcgccg gtaaagagga atatcaataa tcgcgatact
541 ttacttttga gagcaacagg ttacatcttc ggcacatact ttatttattt agtttttttt
601 ttatttcttt ccacctcgct tgtgtgtctc gcggcggttc gattcgatat tattcttatg
661 gtggctcgtt ttatttttct cccctagttc gcagcggcct ctttatgttt caataacgcg
721 cgctaatcgc tagaacaata tactgcgagt tacaaaaacg aaacgctgag ggattggggg
781 aggggaaagc ggcctgaaca attcgatcgt cttcgtccat tatcattagg tttcgcgcaa
841 caacggggat gatgcaagcc gttacaagct acaaaaaaaa taccctaaca acttaattgg
901 cgttatgtat tattacgatt aaaaagaaag cattgctcgt tgaattgtaa aagtacgttt
961 taaattaaaa gtgtgttaca tcgcagtctt tttccaggac ctcaagactg tttcttccga
1021 acggacatag ggtgcgttct atgtccacgc gcgaggaaat ccatacgaat tcgttctccc
1081 gccttaaacg aaagctcctc ttctcattca cggatttcgt tacgccctac gagtttcgtt
1141 atcgatacat ttaatacagc gaatttaatt taacgcggga taatcgctga acacttccgg
1201 gacttcaata ctgtcttgct aacgaatgtt aacgcaattg taggggaata gaggcaaatt
1261 gttttttttt tcttttccta ataaaacatt caaggcgtct gtggaattac atgtgacgca
1321 ctactctgcg tcgtagtgcg gtttctaggt gtaaatgaag gttccgcaac gcgaaaaaca
1381 tattcctaaa gcgagtaaga taagttcgag ggaagaaagg aagaacccga gactgcctat
1441 agtcccctta atatacgtga ctataaagcg cttgaagatc gcgagcgttt ctttaacaaa
1501 aagcggatat aatacgaaca atcgaaacta aataataaca atacgacctc gaccgtccgg
1561 gacggcgcga atcatatata cgaaacgatc aaacgaaatt atcaacagga cctcgttgct
1621 tatacaacat ggcgcatacg cgcggtcggc gatgagaaag aagatcgcga catttttctc
1681 cctttcaaga taagcgagga cgatctcgcg agcttctcat tcagcctaac gctgaccgga
1741 ccgcaatttt ctacgtagac acacgactct cttcgcgtgt gtcctgagac tcatcgaaag
1801 aagaaaacat cgcaactctt ttgtcactga tcgacacacg tccaggtgag atatgagagg
1861 atgggagagg ggaggagggg gaggggtaag ggattactaa attcatatac aagctggcga
1921 gattcagtct ttgtgtgtaa aaaaagaaag aatagtttct ataacattac gatatttatg
1981 atatttatgc ttgcgattaa ttaaaatgtt tattcacgtg atatcacagc gttcatcacg
2041 aaaagagaga aaaaaaaata tatatatata
//