LOCUS LJ617722 1561 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65308.graph_c1_seq9.
ACCESSION LJ617722
VERSION LJ617722.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1561
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65308.graph_c1_seq9"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 493 a 331 c 396 g 341 t
ORIGIN
1 ttgtccatca aatatgtcac atactcaact gagagcctcc ttgagggccc atcaatataa
61 caacgtcaat tacattgtca gaataatgct gagaaagggt ataatcaccg atctggccaa
121 aataccgcac agtctcgatt tatcgagtcc gaacatggcc ggcactatta acgctgcgtt
181 gaaaccgcta gagactttgt cgcgcattat caatcaaccg atgccaggtg cggtcaataa
241 caagtttacg aagccgaaaa atagaactgt ccaggaagaa ccgattggag aacagacggg
301 cactacgacc tctgaagcta cacatgctgt gggcgaggaa gcgaacgagg acgcagagaa
361 cactgaacac gatatctctg tgactgcaga aagcttggaa ccaacttcgg agagccaggt
421 acacgaagaa ggagacgagg ctgcactgga ggatattatg gatcaacttc tcgaaagtgt
481 actgttttcc agggatgttt cggccgtggc ggaagagcaa tcttctcgcg cgcacaggcc
541 aatggacatt gatgatgaaa gtctcgcgat gcgcgacgca gagggcgatt ttgatccgac
601 tcgagatact acagaggact taatgagctc cgactctgac tccgatagca atccatccga
661 tgataatgag gacgaggtgc aggatgatga ggacgaagag gaggaagagg aagatgatgg
721 tgaagaaaat gaagaggaag aggaagaaga ggaggaagga tcgtccaatt atgaggagga
781 tggaatagaa ttttatgaag acgctggaga gggcggcgtt tttcgtatgt ttccctcttc
841 cgaacgcgat ggtggtaatg ttgtaatgat acaacacaac attgaaaatc aggacatcgc
901 gaatacgtca acgccggtta atacgcgacc tagtcttcca tggaatacca cattcccgtt
961 accattaggt ctgtttgaag agccccctgc aggttctgag aacaacggca tcagtactca
1021 cccactgtta atatcgcaag gaagtttgga tacagcaagt actagaacac aacgtgctct
1081 gcgacacaga cggtatcaat acctccaatt atccaatcca cgtagttcaa atccgcctgt
1141 aatattacaa aggtatatac tcttaggccc agctgcccag acccttcctt tgtccgccag
1201 tcaagttttg gcatcgagtt ttagagacac gcgtgtagtt gtaatggata atggattggg
1261 aatattcact aaccaagaag aggagcaaat cgattatgtc gatcagtctg gctatctctt
1321 tggtccgagc cttgccgcaa ctttgaataa tataccaacc gcgttgcact ggtggatcga
1381 agagagcaag cagttggacg gagattctca accagattgt tgcgttggtg ttgtccacaa
1441 gttggtacct ggactagaaa aacacaggaa tgccgagctt gccgagcgca aggagaaacg
1501 taaaaaacaa catggatctg agaaggaaag tgaaaaggat aataaaaaaa aaaaaaaaaa
1561 a
//