LOCUS LJ617715 2162 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65308.graph_c1_seq2.
ACCESSION LJ617715
VERSION LJ617715.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2162)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2162
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65308.graph_c1_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 656 a 444 c 468 g 594 t
ORIGIN
1 tttttttttt tttttttttc cacacacgtt gtagatacat attattcgca attcacaagc
61 aattcgatcc ggcagtcgag gatctcgact cgacacgagc aatcgcaccc acacatacaa
121 gcatacacgc gtacgagtca acggattcga aaatgagaca atgaaaaaaa gagatattaa
181 attaaattaa attaaagaag aaattatgcg ctacagaaat caatcgtaac agatcacact
241 tttttttttt tcgtaatgaa ttcatcgttc atcaaacatt cgaattcgaa acaacgaata
301 ccgcattcct ggcatgcgca gcttggcacc cgaggctctc ccagaggggg agaagtagta
361 ctttcgttcg ctcgcgacga ttcgcgaatt tgaatcttgt aattcgagag agagagagag
421 agagtcgggg ggcgtttggg ttcatcgacc tccccccaaa gggccaaggc gaggtgtgcc
481 aggagtgcgg gctgattgac gcgctatacc atactgttgt tgaaggattc acccgtcgaa
541 ggaccacaaa aaatgaagcg caggacaggt cttgcaaaca cctgttccga acgagtgtgt
601 tagtaataga ggataattaa tacgcgatac tttcttttga gagcaacagg ttacatcttc
661 ggcacatact ttatttattt agtttttttt ttatttcttt ccacctcgct tgtgtgtctc
721 gcggcggttc gattcgatat tattcttatg gtggctcgtt ttatttttct cccctagttc
781 gcagcggcct ctttatgttt caataacgcg cgctaatcgc tagaacaata tactgcgagt
841 tacaaaaacg aaacgctgag ggattggggg aggggaaagc ggcctgaaca attcgatcgt
901 cttcgtccat tatcattagg tttcgcgcaa caacggggat gatgcaagcc gttacaagct
961 acaaaaaaaa aataccctaa caacttaatt ggcgttatgt attattacga ttaaaaagaa
1021 agcattgctc gttgaattgt aaaagtacgt tttaaattaa aagtgtgtta catcgcagtc
1081 tttttccagg acctcaagac tgtttcttcc gaacggacat agggtgcgtt ctatgtccac
1141 gcgcgaggaa atccatacga attcgttctc ccgccttaaa cgaaagctcc tcttctcatt
1201 cacggatttc gttacgccct acgagtttcg ttatcgatac atttaataca gcgaatttaa
1261 tttaacgcgg gataatcgct gaacacttcc gggacttcaa tactgtcttg ctaacgaatg
1321 ttaacgcaat tgtaggggaa tagaggcaaa ttgttttttt tttcttttcc taataaaaca
1381 ttcaaggcgt ctgtggaatt acatgtgacg cactactctg cgtcgtagtg cggtttctag
1441 gtgtaaatga aggttccgca acgcgaaaaa catattccta aagcgagtaa gataagttcg
1501 agggaagaaa ggaagaaccc gagactgcct atagtcccct taatatacgt gactataaag
1561 cgcttgaaga tcgcgagcgt ttctttaaca aaaagcggat ataatacgaa caatcgaaac
1621 taaataataa caatacgacc tcgaccgtcc gggacggcgc gaatcatata tacgaaacga
1681 tcaaacgaaa ttatcaacag gacctcgttg cttatacaac atggcgcata cgcgcggtcg
1741 gcgatgagaa agaagatcgc gacatttttc tccctttcaa gataagcgag gacgatctcg
1801 cgagcttctc attcagccta acgctgaccg gaccgcaatt ttctacgtag acacacgact
1861 ctcttcgcgt gtgtcctgag actcatcgaa agaagaaaac atcgcaactc ttttgtcact
1921 gatcgacaca cgtccaggtg agatatgaga ggatgggaga ggggaggagg gggaggggta
1981 agggattact aaattcatat acaagctggc gagattcagt ctttgtgtgt aaaaaaagaa
2041 agaatagttt ctataacatt acgatattta tgatatttat gcttgcgatt aattaaaatg
2101 tttattcacg tgatatcaca gcgttcatca cgaaaagaga gaaaaaaaaa tatatatata
2161 ta
//