LOCUS LJ617637 1259 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65321.graph_c0_seq1.
ACCESSION LJ617637
VERSION LJ617637.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1259)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1259
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65321.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 397 a 238 c 223 g 401 t
ORIGIN
1 tttttttttt ttttttgtag attagaaaat tttttaaaat ttattttcaa aagtattttt
61 aaaatacttg aaaaacttta tttaatatta ttttttaaaa tattttttct tttaaaagta
121 aattataaaa tatttttaaa tattaatttc ttattattcg tacctaagca cagagcacaa
181 tttaacttaa atttattttg atgatagcaa ttataattat aatcgaaaat atatgtatat
241 cgaaatgaag agatatcaaa gttgcggcaa ataaaatgac aaagttaata gattaagata
301 cttatcccac gatacatcgt tatcattctc cgctattgtg ccgacagcac acacatcgac
361 acactgcaaa gggcgggttg aaatgaaatg acgtttagta tgtttgacag tttcttgtta
421 aaccgacgat taatacgcaa gtaatatcac agacgcgaaa agcgatcgac gcgaccgccc
481 ttcattgctc ttccgtttac atttgcttcc ggaataacaa tttgatggaa atccaggtgt
541 gattaaggta gcttgttagt aaaaattaaa ttacaggccc taagtagata tttgctatct
601 tggtcccatc atctctcgcc gattgcttca aactgtccgt cgggaccgtc ggtaattatt
661 gttgaaaaaa tactatcgtg attcgagatt tcattggacg actaggatta gtgacacttg
721 agtgatactt taattataat atacctcctc ctctctctca tcggctctcg ttaatgtcga
781 cgcgatttac aatgatacga taaatcggtt gagaactcaa gcggggagaa gcgtcgctac
841 gcgagaagca aacgtttatt atttggagca atcgcggacc acgtcgtgtg tcaccatcgt
901 ccgtaactcc ttaccacata catatatctt tctacgcgaa aagatacggc gtgcagagag
961 atattataat cacgcgtgaa acagtgaaga aatttttaga gaaagttttg cttctgctct
1021 acatgacacg cgctatacgc ggtaagaagt taattaatta acattaaagt attacgttat
1081 ccgccgaatc gcgtctcgcg acacgatccg gcgagtccgt taaagatccg gcataaatac
1141 gcaaggctat cccatcgcga gggatctcgt cgatccctta acagtacgtc gctcattaca
1201 caaatgtaat tactggtttt cacgtaccac acttttgtcg cggtgcaata caatagaca
//