LOCUS LJ616884 1006 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65754.graph_c1_seq1.
ACCESSION LJ616884
VERSION LJ616884.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1006)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1006
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65754.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 306 a 199 c 217 g 284 t
ORIGIN
1 gaacagttgt cagtcgcagg actttcctcc cggggaggaa gtatcgtcac tgagcgacgg
61 gaacgagcac tttcgccgcg gtggcttcca cgagaatcgc gcacgtgttg ctaggctacg
121 ctctggacgc gtacgtttct ataacgacta atcaacgact tataataacg gcgggatcgc
181 agcttctaca tataccgcgg tcgggcgtgg cgggacaact taatttgaat tatgctgaat
241 ctacataaga cccagggtct cgagcgcgcg tggaagatac aattaatcat cattggaaac
301 taaaaacatt taagtactca ttaagatttg ggtaagagat tgcgaacaaa ttgcgcttca
361 acaagtcaaa ataaacatgt aaaaatgttc gagctttaaa ttcgaacggt ttgaagtgct
421 attgatcgat tggaagattc ggttgttcaa gtcttgatcg aatcgaccga aaataattgc
481 aaataaaaaa aagtaagctc ttgttcgttg cattttagat ctgcagagat caggtgtaac
541 gatgagatat cgaacaggta cgttctttat gttggaacgg tctgaacaat ttaaggttcg
601 atcttgaaat tcgtgttgat tgaccgaaaa tttcgatata tgaaaatttc aagcgttatt
661 aaatatctct ctcggatttg aaggcgtgaa gacattcata aaatatgatt caaatggctc
721 cgcgaggaat gatgaatggt ttccttcttc cttccttttc tccttgtttt tcctcaatga
781 tctctcccta attcccttta caatcccttt gtgttcctct cactgtccta tatagagatg
841 ccgcacctcg agtctataat cgcattcagc ggaagctaag aagctatcgt catcggatgt
901 catcatcagg aaccgaactt aaaacgaggg tatacaacgc cggccattaa tttgcgaacg
961 cttactgaaa gttataagtg aaagttaaaa ggaaaaaaaa aaaaaa
//