LOCUS LJ616428 1810 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66093.graph_c0_seq1.
ACCESSION LJ616428
VERSION LJ616428.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1810)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1810
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66093.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 585 a 242 c 273 g 710 t
ORIGIN
1 tgctcacgtg cgtaggaaac atcctggcaa tagagtatat gccatcgacg tgtgtaaagc
61 aggctcgtaa tgtaagatta aggctgttaa cgtgagcttc gtaaaacttt ttttaaaatc
121 tttttgagga aaaaatcctc ttttcatttt gtcgtgcaca gttctgaaga aacgcgattt
181 tgttttccgt gttataatac aaaatattca aataattgca cgacatttgc tatattgcac
241 ttgaaatagt aattgttgat accaaatcat ttttatagaa tttttatata gaattttttt
301 ctttgtactt gaattttaag agtttttctt gtttaaagtt gttaaaagta tagtcttgtt
361 aaaagtatag acttgttttt ggtttaaaaa ttttttgata cttatgtttt taaagaaata
421 ttagatcatt gatcatgaaa tattataggt atgaattata ttgagaagcg aagatattga
481 gaattggaaa tacttcgtaa ttctttttta ttaggaaagg attccgtttt tgttaatttt
541 gagaatcctt gcaaaattaa caattctagt cgaatatatg tatatatttt tgagatatgc
601 atttgtttga tattatattt tattaatata tcacgtttta aatataaatg atagacataa
661 taaaacttcc tcttcgttgt cttccatata aaaaattgca aagagaattt tgtgtcttat
721 caggttcata ttgatgaaaa gaaaccaata ttctcaatca gccgttataa acattatata
781 tatgtgttta tatacaatat atctatatac acatttatat cttattatat taatatatta
841 aaaaattcca aataattcga tacatggttt ttcaacgtta tatacagatc atgtgtaatt
901 catttcgtta ttttgtatca tcctttcatt ttgttattta gtgtaataca ataaatacag
961 acgattctgc gctcataaaa ttagtattta tattgatttt actttattaa atcaacgttc
1021 tgtaattagt taaatgaatg ttcaatatca aattatcaaa ttagcattta ggcaacattt
1081 ttagtgatta ttgtcaagta ttggctcatt gttactcttg taccactgta cttagtatat
1141 ttttatgtct tcgcgtatgc accgaattat tctgtaataa tttgtctttt tttcgtgttt
1201 taaacattaa ctagcgatta acacggttaa ccaataggat atttgcattt tttagaaggt
1261 aagtactctc taagaaccgc gtgatgcaga tgtgcgtgaa tcgatctgta aaatccagca
1321 tctacggcag acttgtaggc agatgtgtta ctgcttgata tgcgacggat tctttaattg
1381 gtgctacaat ctccagcttc attttaagtt tgcgtacgat cagttgtcgc aattcaactg
1441 tcccttccgt acgaagcgca tgtcgatatg tgccatattg atcgaaattt tgccgacctg
1501 tgcaaattgc agtaatgtaa ctcttggact tagagtagat tatcttttaa ttacacgcgt
1561 agctcaaatc tcgttgagat ttatgtacgt aaattttatg taaatcgtta cgaattaaat
1621 tatagttcag tattgttaaa ttaaaacata tttcctttaa atcccttaaa tcagaaacaa
1681 ttgtgaattt tgcagaaagg agttttaagt ttatttttac tctacacaga ctacagttta
1741 cttgcgtaga ctatacgtgt tctgtagata ccaaataaaa tgttattatt aaattttaaa
1801 aaaaaaaaaa
//