LOCUS LJ611962 1102 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64582.graph_c0_seq1.
ACCESSION LJ611962
VERSION LJ611962.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1102)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1102
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64582.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 241 a 231 c 200 g 430 t
ORIGIN
1 ggttttttgt atgcagtata ttttgtatga caaacatata tattttatgg aaatagaata
61 aaacctctcg gaaatatata tcagtatttt aatcgctttc aggtatttat ttgacggaag
121 cctataggtt tgaatataga aattccataa agctataaat tcagaacctg tgatcttttt
181 ttctttttct tcttgctttt tttatttctt tttttgtttt tgtttttgat tagtctctta
241 tctctcatat gatcattagc gtctcatagc tattcgattt atccctgcaa aggataattt
301 atttcttact tctcatttga ttaacacaca ggtaattaaa aactcccagc tgcatacggc
361 cgacacttta tttttaaatt gattcggaaa atgcggaatt aattgttctt cttctctctt
421 cctaacgctg tgttgctttc gtgcgtgctc ggataagcgc tatcgccgaa gtcggcttta
481 tatcttttga gtatcttttt accgtcttgg tggtgaacct cgatattgcc tttattagta
541 cttttttgct cgacaacaaa tggcttatgc gacggcacaa tagtagattt ttcaccggtt
601 tgataatgtc tctgatctaa gttcttctgt aagttcgtga cactggttat ttgctgcgtg
661 ctcgcttgtg gaacacttga ttgactaaca ttctcttctt ttttattgta ttgcgatatc
721 ttgctgccgc cggcagcttt actttggcgt tcattgcttt gaactctttc cacggactga
781 ttgctgctac aacaattcga ttgcttttca cttttctccg caccgacttc tttcaatgac
841 aagtaatcgt cgctcttggt gcccgtcggc gagtcctttt cttcggctat tcgcggtaat
901 tgcgtgctac cgcaggaatt tgacatacct acattcccta aattaatgga tataccatgg
961 gttaatttgg aataatccgc cttctgctcg ctcgacactt tcttctcgcc cttcgcgctt
1021 tcgttcgcct ccttgaaatt atcgctggat tcgtccgaga tttcgctgtt gttgtgagac
1081 gattgcgcaa tggtcacgcg ag
//