LOCUS LJ611212 3346 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64549.graph_c0_seq2.
ACCESSION LJ611212
VERSION LJ611212.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3346)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3346
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64549.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 992 a 517 c 596 g 1241 t
ORIGIN
1 ggacttaaaa tttgcatatt gaaggaatat attcgcgaca agcaaccggc gatgtgacaa
61 ttgagagtta actgactatg gctggttatg ttcacagaaa agggtaaact gtcacgcaac
121 agtgttatac agtaaaaaac gtatacgacg ataaatcttg atagtgcaat atttttgctg
181 tcactaattc gagctctgtt aaaactgaca atcgttctgc attggacgaa taacttctga
241 attattacaa aaattattcc cgattgtgtg aagcagtctt tagtatttgc tcgagatgga
301 agatgcgcaa gaggagttgc aatttgtggt agatgatgta agcaacatta tcaaagaagc
361 aattgaggta tcaataggag gcaatgcata tcagcataat aaagtcaatc aatggacttc
421 aaatgttgta gaggcatgtt taggcaatct tacaaaatta cagaaggctt acaaatatat
481 tgtaacttgt acaatcatgc aaaaaaatgg agcggggctt cataccgcaa gttcatgtta
541 ctgggataat gttactgatg gcagctgcac ggtacgttgg gaaaataaaa ctatgtattg
601 catcgtgtct gttttcggat tggcccttta gatttattta tctacaaagt ataattctgt
661 gctcgaaaat aatttaataa tttcatggat atgtagtaag cgcactactt tcaaaaataa
721 aatgtttggt tctaatgtta tttgacaaaa tttaatattt ttacacgaat ttgcagaaat
781 tgaagctaag agtagtagag cacaaataat tgtgctattt gtatgtagtt aaagcaatga
841 tgaatatatg tgatataaat aaaatcgagc atatatactt atagaaatag gtgcgggaaa
901 atatatttaa ttttcttaga tttgctttta tgagaaatga tattctttcc atctatatat
961 tgtaactttt atgaaataaa tataaaagga cattaattac aattcttata ttattgcaca
1021 agataattgt gcatgttata taaaataaag tatatatgta ttcagcaaac aatctgaaat
1081 tgtatacaaa atgtccttaa agaacttgtt cagtaaaata agcttataag tcgtttttga
1141 tattttttca aatatttaag tgaggattta aacttaaaca agtacaaatg agattatata
1201 ctttgatttc catcttcgtt tatttataaa taataaagta atcttcttta acattttttc
1261 aaaattacac agttctctaa aaacattttg taacattacg cttgcgcttg taaacaaatt
1321 aatgataaga aataagcgaa tcttgttcaa ttattcttcg catcaagatt atatcgtcga
1381 aattatatga aacaaaagtt tgcttactga tcttgctatc atataaataa acatcaatta
1441 tttaaaagga ctgacgattt ttttatgtat gtgcgaatga atgaacaagt tgagtctaat
1501 acaatttata actctgtagt ctgaggtaga ctttcatcgt cttgtaaagt agtatttaat
1561 aaatgcaact cgtcatctaa gagaactaga ttataattta atctactgcc gaattcatcg
1621 tcgatataca tatcctcggt caaatattga ctggctggca tatttttttt gtgagtaatt
1681 tttggaacgg acattattgt caaagtattc agtcttgcgg gtagagaacg tcttcttggt
1741 gaatctttta ttgcaatact attcgagata gcatctacat tgacatattt catctcgtgt
1801 gttttagaat ccactctggg ttggtgcgag tttgacataa tcttatttgt aaaggccata
1861 ttactttgat ccgttttttg caagtcgatc gactgttgct cccgcgttga cattcgagat
1921 tcgtttgacg ttttcatggt tgcggaactg aatgttccac tatttataaa agcttgattg
1981 aaaatttctt catgtctttt ggaggtttcg atattatttt ctgtgtttct aacttcattt
2041 attcccagga aattactgtt gccaggcgtc catctttcga taactctgat tttttggttg
2101 ttttcatatt ttgtttcata cagatcttcg gatactgttt cgaattcata cgcgttagtc
2161 ctatcaacct tggaattaca aatttttgat ggtgctacca agcgtactat ttctgtggca
2221 cgatcaagag catctttcag atcttgtatg gatttatttg aaagatttgg gacctttgtt
2281 gatacataat cacttatcgt gtcttgtaag gatgactctt tatcatcttt ggtacagtta
2341 cctttttcct tgaactcaat agtgtatgta gcttcattat ttgtcaagtc tgttttggaa
2401 tgttgtgctt tatcatcgtc agtgatagga gtatcgttat aatttgattc ttgtagcaat
2461 gataaatctt ctatctgctc tttactgtca cgtcccattc gtgataagca aatctccttt
2521 tcttttctcc ataatgtcga ttcgtaaaaa cttttagcat cagaatgcaa aatccgaggt
2581 tgtattattg cttgcttaat gatcgcaggc atgcttggat acggcgtctt tcgttgggat
2641 gtgtatgacg atttcggaat agtcccatta tattcattgg gtgacttctt gtatttaggt
2701 tctatagtag ttgtgtgact agctggttta catgttatac aattgggact tctttcttcc
2761 gacagtaatg tgcttgtggc ttgtggactt gcggttgaat aagaagacat tgaatcgttt
2821 ccaaagaaga aatcttctct tttactggct attagttctt tcaaacgttt tatattagct
2881 cttgcgtcat ttacctcgtc catgttatac attatatctg aaatttctgc acaacgagtg
2941 caaggagtgg tagttttcat ttcaatcata ggactcacga tactatcatc gatgacagat
3001 gtgtccgtct tttcgacatt atttttagaa tctaaatcct cattgtattg ttttttctta
3061 cacttgagaa attgattaga ggaggatttt ttcattatgg ggcaatgcga tgatttggca
3121 attggttttc tgatcaacgc cttattttgt ataggtgacg cagcaaaagc ctttttatat
3181 aatgcgtttt tatcattata caaaagatca ttattgttgt ttccgcattt actcatacat
3241 gtgctatcct tctcttcttc ttcatgtatc atcagcagcc tatgaagtct ccttcctatt
3301 ttgtccatgt ccagtgtcat tttcgtctca tctgggtgca atccag
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