LOCUS LJ610454 2216 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64691.graph_c1_seq3.
ACCESSION LJ610454
VERSION LJ610454.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2216)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2216
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64691.graph_c1_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 699 a 459 c 426 g 632 t
ORIGIN
1 ctgatgggat gcagaatata aacttcccgg agaatattga tctcgatagc gtccaggaaa
61 gcagttcgga acgcatgcca aatgtaacga tacattccga aaacgatgtg tctattgccg
121 aaaacttgag atttatgaaa tcacctggaa aggacaggca gctcgcgatt gaatatcacg
181 gatgttcaaa tgatgtcaat tataagcagt ctctcgacat aaaagccaca gaaggtatcc
241 acgataagaa acatcagtgt gaggtatgct cgaaacaatt ctcacaaaag tccaagctat
301 ttgctcatca attgtctcac tctggtcagc agccgtttaa gtgtccaaca tgtggcaaag
361 gttacgcatc gaaaagtaag cttagcgcac acatgagatt acacaccaaa accaacgtac
421 atcaatgtaa agtgtgcgat aaaatatttt cctatccatc atacttagag gagcatataa
481 aaattcataa taaaagtgat aatactctgc aaagcaagga ctacgagtgt gctacgtgca
541 ataaacgttt tcgtctttta aaaaatttga aagctcacga aagactgcat accggaaggg
601 gtttggtgca atgtgagatt tgtgataaaa agtttagcca taattataat ttaaaaatgc
661 atttgcgcac gcacaagaca tcgagggtac acaagtgcga atattgcgac aagcgcttcg
721 tgcagaaggg caatctggtc gagcatttgc gaatacatac taaggtgaag ccttttgcgt
781 gtaaactatg cggcaagaga ttcgcgcaat cgagccatct taaaagtcat gaagcttcgc
841 acggcacgtt gaggcagcac caatgtcgat tatgtggaaa aagatttaag ctggccaatc
901 atttgaaacg gcatttaaat ttacataccg gttcaaagac ttataagtgc aatcagtgta
961 atcaaatgtt ttcacagtct tttagtttga cgagacattt aaagaagcac aacgaatcac
1021 atatataatt tatatacaat aaatttttat gtatatacaa atatataaac acgaatggcc
1081 gttgcaaata catctttcat aataataaga tttttcctta gacatagtta ttatatagcc
1141 attatctttt ttattctttt acgacgtcat cttaatgtat cctcaagaaa tctaagaatt
1201 taaggcctaa gatttgaaag tttaaacatg ttttttggaa taaagtaata cggctgatag
1261 aaaataaata atacagaata atgcgataaa aagtaatcta ttttatcata aaaaaatagg
1321 tttgtcatac aatcttggta aaattttaaa tccctttatt tataattttt gaggaccgta
1381 gtgagaatgt ttattccttc tcgtaattgt tcctctgtaa ttgttaaagg aggcgatatt
1441 ctgatgattt gcccatgcgc gggtctagac agcaatccag cgtctctcaa ctttaggcag
1501 atgtcccaac cctcggcgaa ttctttgttt atcacgagac cagctagaag accgcgtcca
1561 cgaaattccg tcgcgatgtc tttcggcagt ttttccagtt cttcctttag aatttttccg
1621 agtttttttg cgttctccgc tagattctcc tcttccagaa ttttaactgc ctctaaagca
1681 actctgtttc caagtggact cccaccgaaa gtgcttccat gcgaacctgt ttctaaacag
1741 agcattatct gatcatccgc taggacaccg gaaactggat acatcccacc ggagagtgct
1801 ttccccaaaa tgagaatatc cggcctgcag ccttcgtgat caactgccag acgcatacca
1861 gttctgctaa gaccagtctg tacttcatcg gcgatccata gaacattata ctttgtgcac
1921 agttctctca cacgtttcaa ataaccatca gacggcacaa cgacgccggc ttcgccttga
1981 atgggttcca tcatgaacgc gcagatattg ggattctctt gaaacttttg ttctagaaca
2041 acgaggtcat tgtacggcac tttttcgaaa aggggcacat acggaccaaa atctgtgtaa
2101 cagtttggat ctgtcgaggc agataaggct gctattgaac ggccccaaaa gtttcctgcg
2161 gcaaacacaa cagtagcctt gccattaggc acctttttca ctctatatcc ccagcg
//