LOCUS LJ608903 1652 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64814.graph_c0_seq11.
ACCESSION LJ608903
VERSION LJ608903.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1652)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1652
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64814.graph_c0_seq11"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 598 a 290 c 272 g 492 t
ORIGIN
1 gagatcaaaa tgtatccgaa aggaactaga gggaatactt atcgttctgc cagacacata
61 aaagaaactt ttgtggcaat tagttcatcg ataaaacaaa aaatatacag acaaagggca
121 gagtgcgacg tccaaaaaat ggaatattac agataatata aacaagacgt gacatttcaa
181 gactcaggga accgtggact tagttttaaa gttgttattt catcgatgta taagacaaga
241 aattaactct aggcctttac ataattccat gtacgacatg tgacaaccaa ctagtgacat
301 ccattgtcgc ctaaacgatt tatacgcaga acaggcttta atgtttcaca aacaaaacac
361 tatcttatca gcactcaaca ggaaagagta tatttagtta ctgtgtgctg tttagttctt
421 ttcactgctc tcctacagag ttgtacgtta ttgcaacgta tttacaacac aatgtctaga
481 ttatcgtata cctacagagg tctcattgtt cccgtgttaa ctccttttaa caatgatgga
541 tctcttaatc tggacattat accacaatat gcaacatatt tagcaaagaa tggaatcaaa
601 ggtatacttg ttaatggcac aagtggtgaa ggaatgtcaa tgtctgttgt tgaaagaaaa
661 cttattaccg aaacctgggt aaaggcagtg aaagaaacaa agcaacacct gatgattcaa
721 gtaggaggcg cacctcttcc tgatgttatc gaacttgcga aacacgcaag tagtctgtca
781 gtggattcta tactctgctt accagaattg tacttcaagc ctactactcc tacacaactg
841 attgaatact tggaaatagt tggtcaagca gcaccaaaga caccgttatt atactatcat
901 attcctatga tgacgaatgt taacatacat atgggacaat ttcttgaatc aattagggat
961 aaaatacctc aatttgtcgg tataaaattc actagctcaa acttagagga aggagcgcaa
1021 gcactacgtg ccgacgatag aaaatatgtt attttccttg gcaataatca gttgataaac
1081 gctgcatacg cattagggat ggattccttc atattaagca gcataaacgt atttccggaa
1141 cttgtattgg atatttttgc tgcttgcaag agtggagata cgttaagagc taaaaattta
1201 caagaaaaac tttcaagcgt tgtagttgct ataatgaaac atggtaatcg agtgcaggct
1261 atgaaaatag caatggccct tcttactgac attgacactg gagtatctcg tgcactacct
1321 aaatctgttt tttccgagat cgtagaaact gagataaaag atttaacaag cttaggatat
1381 caaccaaaaa ttaaatatta ctgacaatga aaatattttc cttctctacc ttatcgtatt
1441 tatatagcat atattatctt ttttacaata aattattcaa tcataaacat aaaataacgt
1501 tacagtaaca cgcgcatttt ttaaaaataa atatctctaa caataaatat ctctaacaac
1561 ccaaaaagat taattcatat tgttacaatt ttgtcaattt tgtaaatata tatcataaat
1621 atattgtaaa ttcatcaaaa aaaaaaaaaa aa
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