LOCUS LJ608772 1957 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64246.graph_c0_seq11.
ACCESSION LJ608772
VERSION LJ608772.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1957)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1957
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64246.graph_c0_seq11"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 600 a 411 c 333 g 613 t
ORIGIN
1 atacacatat atgtatgtag attatataaa tttctctgct tatttaacaa catcaatcta
61 cgaaatatat atatattatc tgtactgtta ttaatcatca gaaataaaag aaaaaagtaa
121 tggtttatta cgatatttga actaacatta acgcgcaaat gtgaatacaa gagttactac
181 agattattca ttgtatatgc atgaggaatt accttctcta gttcgtaatt ttgcatgtta
241 cataatacat atgtgtaaaa cggagagtat gtgaaacgga acgcgagtgt aagagatctg
301 tacagaaaat cgctcatagc cgaggtatag atatatcaga gaaaggcata cactgtcgtg
361 atttcatatt tgagacggta gtttatttct ttaagttgct atactgaaat agtgcagatg
421 caggaataag aagagagatc acgcactgtg tgtatactat taatatatct cttaaaagtc
481 tcagagcctg catgcgaata aatccagtgg cgtccgttgg ttcgaaatca ccttgcacat
541 ccatggagac gagagtctga ttgtacaacg agatctcgct cgatctggcg atcgccatag
601 cctttccttt atacaaatgc accctcactg tgccgtttac atgcctttgt gaatgctgga
661 tacattcccg cacaaagtcg cattccggcg aaaaccaaaa accattataa acgtaatccg
721 acatcttatc cgtcaaatac gttttaactc tcaaaacttc acgatccaaa gtaaatactt
781 caagatctcg atgcgcaacc tccaaaatgt taacgcccgg cgactcgtaa atgcctcgag
841 attttagccc aatgtatcga ttttcaacaa tgtctatccg cccaatacca tgcgcacccc
901 cgacctcgtt gaggtactcg attattgcga gaggggcgtt gaatattttt ccatttttca
961 gattcttcac attaatcgga tatcccttct taaagttaat ttcgatttct tccgcttcca
1021 aagcggaatc ggtcggatca gtggtcatat tgtagagtcc tttcggcgct ggaatggcag
1081 gattctccag tatccccgat tcataactaa tatgtacgag attagcgtca gtgctccacg
1141 gttcttttgg cgttgccgag attgggattc cattttgtcg agcgtattcc aacaagcccg
1201 atcttccttg aaacttggta taaaattcga cttccctcca cggagctaaa atcgtgattt
1261 cagggtacag gctgtagcag tttaattcaa agcgaacttg atcattcccc tttccagttg
1321 ccccatgtgc aatgacacta gcaccttcag cttttgcgac ttttattaaa ccttggctga
1381 tacatggtcg tgctatggca gtacccagaa gatatcttcc ttcatacaac aggccgcaag
1441 ccacagcagg ccatacatag gaagttacga acacttctct gacgtcgtct atcacgacct
1501 tgtgataaat aacttattgt tacaaattct tcaatgaaaa tattgtgttc gtttttgtta
1561 taaatacaaa attataaatt atacataaca aataatgtac tacatagttt ctcatttcat
1621 tctgtattat aaaatgtttc atgacaaaaa gatattttac cttaacggca ccaactttaa
1681 gtgccttatc tctaattgca tcaaaatcct ccttttgccc gatgttcgcc acataagcga
1741 taacttgata tcctttttct tttaaccaca acaatataca agatgtatct aaaccaccac
1801 tatacgctaa aattactttt ctttttgaat ctgacatttt ttaaaacctt gctttttcga
1861 ttggaaatta aaaaacgtta aattaatgga aagaagaaaa cagctgttaa cagtactaaa
1921 gtctgagatt atgtttcccc catgtactct gcgttga
//