LOCUS LJ608770 1690 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64246.graph_c0_seq9.
ACCESSION LJ608770
VERSION LJ608770.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1690)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1690
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64246.graph_c0_seq9"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 496 a 378 c 297 g 519 t
ORIGIN
1 agcagtggta tcaacgcgag tgtaagagat ctgtacagaa aatcgctcat agccgaggta
61 tagatatatc agagaaaggc atacactgtc gtgatttcat atttgagacg gtagtttatt
121 tctttaagtt gctatactga aatagtgcag atgcaggaat aagaagagag atcacgcact
181 gtgtgtatac tattaatata tctcttaaaa gtctcagagc ctgcatgcga ataaatccag
241 tggcgtccgt tggttcgaaa tcaccttgca catccatgga gacgagagtc tgattgtaca
301 acgagatctc gctcgatctg gcgatcgcca tagcctttcc tttatacaaa tgcaccctca
361 ctgtgccgtt tacatgcctt tgtgaatgct ggatacattc ccgcacaaag tcgcattccg
421 gcgaaaacca aaaaccatta taaacgtaat ccgacatctt atccgtcaaa tacgttttaa
481 ctctcaaaac ttcacgatcc aaagtaaata cttcaagatc tcgatgcgca acctccaaaa
541 tgttaacgcc cggcgactcg taaatgcctc gagattttag cccaatgtat cgattttcaa
601 caatgtctat ccgcccaata ccatgcgcac ccccgacctc gttgaggtac tcgattattg
661 cgagaggggc gttgaatatt tttccatttt tcagattctt cacattaatc ggatatccct
721 tcttaaagtt aatttcgatt tcttccgctt ccaaagcgga atcggtcgga tcagtggtca
781 tattgtagag tcctttcggc gctggaatgg caggattctc cagtatcccc gattcataac
841 taatatgtac gagattagcg tcagtgctcc acggttcttt tggcgttgcc gagattggga
901 ttccattttg tcgagcgtat tccaacaagc ccgatcttcc ttgaaacttg gtataaaatt
961 cgacttccct ccacggagct aaaatcgtga tttcagggta caggctgtag cagtttaatt
1021 caaagcgaac ttgatcattc ccctttccag ttgccccatg tgcaatgaca ctagcacctt
1081 cagcttttgc gacttttatt aaaccttggc tgatacatgg tcgtgctatg gcagtaccca
1141 gaagatatct tccttcatac aacaggccgc aagccacagc aggccataca taggaagtta
1201 cgaacacttc tctgacgtcg tctatcacga ccttgtgata aataacttat tgttacaaat
1261 tcttcaatga aaatattgtg ttcgtttttg ttataaatac aaaattataa attatacata
1321 acaaataatg tactacatag tttctcattt cattctgtat tataaaatgt ttcatgacaa
1381 aaagatattt taccttaacg gcaccaactt taagtgcctt atctctaatt gcatcaaaat
1441 cctccttttg cccgatgttc gccacataag cgataacttg atatcctttt tcttttaacc
1501 acaacaatat acaagatgta tctaaaccac cactatacgc taaaattact tttctttttg
1561 aatctgacat tttttaaaac cttgcttttt cgattggaaa ttaaaaaacg ttaaattaat
1621 ggaaagaaga aaacagctgt taacagtact aaagtctgag attatgtttc ccccatgtac
1681 tctgcgttga
//