LOCUS LJ608764 2120 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64246.graph_c0_seq3.
ACCESSION LJ608764
VERSION LJ608764.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2120)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2120
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64246.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 634 a 449 c 375 g 662 t
ORIGIN
1 agcagtggta tcaacgcgag tgtaagagat ctgtacagaa aatcgctcat agccgaggta
61 tagatatatc agagaaaggc atacactgtc gtgatttcat atttgagacg gtagtttatt
121 tctttaagtt gctatactga aatagtgcag atgcaggaat aagaagagag atcacgcact
181 gtgtgtatac tattaatata tctcttaaaa ggtacggtac attatattat aatcttcatg
241 agtatgctaa ggtaatttta agatttaatt aataactaaa ctgaaagcaa aaaagatgta
301 gtaatagtgt tttattgcga aacctcacct cccttccacg acgcatgcac gtgattcgca
361 aagcaatcgg acttctagag acggattttg tctagagtta attacgtttt atcacacgat
421 tactcttctt gctgcgatat cttgcaaacc tttcagaaac cgttcagtca tttcgaaata
481 tcgagttatg tttggaggag aattaacacg catagatatt taaggcgaat aaagtagcgt
541 cgagtcaact acagtgcgtt ctttattgaa atttatgaaa tttgcaataa agtcttgatt
601 cagacattgt gttgtttatt gaaacgatga aactctttca gtctcagagc ctgcatgcga
661 ataaatccag tggcgtccgt tggttcgaaa tcaccttgca catccatgga gacgagagtc
721 tgattgtaca acgagatctc gctcgatctg gcgatcgcca tagcctttcc tttatacaaa
781 tgcaccctca ctgtgccgtt tacatgcctt tgtgaatgct ggatacattc ccgcacaaag
841 tcgcattccg gcgaaaacca aaaaccatta taaacgtaat ccgacatctt atccgtcaaa
901 tacgttttaa ctctcaaaac ttcacgatcc aaagtaaata cttcaagatc tcgatgcgca
961 acctccaaaa tgttaacgcc cggcgactcg taaatgcctc gagattttag cccaatgtat
1021 cgattttcaa caatgtctat ccgcccaata ccatgcgcac ccccgacctc gttgaggtac
1081 tcgattattg cgagaggggc gttgaatatt tttccatttt tcagattctt cacattaatc
1141 ggatatccct tcttaaagtt aatttcgatt tcttccgctt ccaaagcgga atcggtcgga
1201 tcagtggtca tattgtagag tcctttcggc gctggaatgg caggattctc cagtatcccc
1261 gattcataac taatatgtac gagattagcg tcagtgctcc acggttcttt tggcgttgcc
1321 gagattggga ttccattttg tcgagcgtat tccaacaagc ccgatcttcc ttgaaacttg
1381 gtataaaatt cgacttccct ccacggagct aaaatcgtga tttcagggta caggctgtag
1441 cagtttaatt caaagcgaac ttgatcattc ccctttccag ttgccccatg tgcaatgaca
1501 ctagcacctt cagcttttgc gacttttatt aaaccttggc tgatacatgg tcgtgctatg
1561 gcagtaccca gaagatatct tccttcatac aacaggccgc aagccacagc aggccataca
1621 taggaagtta cgaacacttc tctgacgtcg tctatcacga ccttgtgata aataacttat
1681 tgttacaaat tcttcaatga aaatattgtg ttcgtttttg ttataaatac aaaattataa
1741 attatacata acaaataatg tactacatag tttctcattt cattctgtat tataaaatgt
1801 ttcatgacaa aaagatattt taccttaacg gcaccaactt taagtgcctt atctctaatt
1861 gcatcaaaat cctccttttg cccgatgttc gccacataag cgataacttg atatcctttt
1921 tcttttaacc acaacaatat acaagatgta tctaaaccac cactatacgc taaaattact
1981 tttctttttg aatctgacat tttttaaaac cttgcttttt cgattggaaa ttaaaaaacg
2041 ttaaattaat ggaaagaaga aaacagctgt taacagtact aaagtctgag attatgtttc
2101 ccccatgtac tctgcgttga
//