LOCUS LJ605054 891 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c63557.graph_c0_seq6.
ACCESSION LJ605054
VERSION LJ605054.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 891)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..891
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c63557.graph_c0_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 313 a 158 c 166 g 254 t
ORIGIN
1 cagtggtatc aacgcaaagt gaaagaactc tcgtctgttc tccgtaaatg tctcaacaat
61 ttctgtctat tttttttcgc aaaagtcgcg tcgtcgaaat gtgcgatata taggatgatg
121 ttttcgaacg aaagtcctgg agaacgcttg gagagatatt tttgttaaaa atcagtctct
181 ctctgctact ctgaaaacga actttttact ttaatttgtc gtctttaaac tctcgacttc
241 caaaccaatc gtataattcg tgggttaaag ggcaatcgac tgcccctcga aacatcctat
301 atatatatgc aatagatgaa taaatatgca tcgaaagaat tacatcgact cgctcgcgta
361 aagctcgttc gcggcgcaaa cgtggcgtat ctcgtcgaat gtctaaaaga gatatttctc
421 gccggatttt tgtgtgactt ccaaaaaaaa gggaaaaaaa aacagctgaa tatatcgcga
481 gaaactcgcg aaaccaactc gaattaaatg ccgattctcc gatttcgagg gagcactccg
541 attcgaaacg taaatatatc ggcgtttcac ggcgccgcgg ataattaaaa taaataaaaa
601 aaatactata tttattcgaa cgacttgcca agttttgttg cataatgtac gcgagataaa
661 gtcggcaata aaaataatca tacaaaaaaa agaaggttaa taaaacggtt gatggatagg
721 aatgatctgg cgggatttaa cggacataag ttacatagct attgtgagca gttttcacga
781 aatattgatg tatatatctt aagtttgtat tataactctc cccacactta atttgtatga
841 aatgaagaat ttcgaacatt aaaatcatga atgaaaaaaa aaaaaaaaaa a
//