LOCUS LJ605051 1002 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c63557.graph_c0_seq3.
ACCESSION LJ605051
VERSION LJ605051.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1002)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1002
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c63557.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 344 a 187 c 195 g 276 t
ORIGIN
1 atatcgcggg gtgaaaaaaa taattcgcaa cgggtctctc gggaacgagt cgaaaataat
61 aggccataca tccggtgact tccgtcccac acgtgcaacc caagttgcgt ggaacttctc
121 gcgggcaaag tgaaagaact ctcgtctgtt ctccgtaaat gtctcaacaa tttctgtcta
181 ttttttttcg caaaagtcgc gtcgtcgaaa tgtgcgatat ataggatgat gttttcgaac
241 gaaagtcctg gagaacgctt ggagagatat ttttgttaaa aatcagtctc tctctgctac
301 tctgaaaacg aactttttac tttaatttgt cgtctttaaa ctctcgactt ccaaaccaat
361 cgtataattc gtgggttaaa gggcaatcga ctgcccctcg aaacatccta tatatatatg
421 caatagatga ataaatatgc atcgaaagaa ttacatcgac tcgctcgcgt aaagctcgtt
481 cgcggcgcaa acgtggcgta tctcgtcgaa tgtctaaaag agatatttct cgccggattt
541 ttgtgtgact tccaaaaaaa agggaaaaaa aaacagctga atatatcgcg agaaactcgc
601 gaaaccaact cgaattaaat gccgattctc cgatttcgag ggagcactcc gattcgaaac
661 gtaaatatat cggcgtttca cggcgccgcg gataattaaa ataaataaaa aaaatactat
721 atttattcga acgacttgcc aagttttgtt gcataatgta cgcgagataa agtcggcaat
781 aaaaataatc atacaaaaaa aagaaggtta ataaaacggt tgatggatag gaatgatctg
841 gcgggattta acggacataa gttacatagc tattgtgagc agttttcacg aaatattgat
901 gtatatatct taagtttgta ttataactct ccccacactt aatttgtatg aaatgaagaa
961 tttcgaacat taaaatcatg aatgaaaaaa aaaaaaaaaa aa
//