LOCUS LJ605049 1120 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c63557.graph_c0_seq1.
ACCESSION LJ605049
VERSION LJ605049.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1120)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1120
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c63557.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 363 a 231 c 261 g 265 t
ORIGIN
1 aagaaagaaa gaaagaaaaa gaaaaaaaac aggctgccac ggctgtgcct gattcaaggg
61 cctgattcga gtcgaaacgc gtctgcctcg cgatcgatcg actcgtatgc gcgcggcgaa
121 tttattcgag tttgtattat tagcgctaaa ttaattgatt cgaatagaga tctcccgcta
181 agtagcgaca cgcgaattga tcagagcgac gagctctcca gcgaacgagt caaaagaatg
241 ctgaggccgc atccggtgat ttccgtccgc gtacgcgtga cacaagtccg cggtgaggaa
301 gaagcgaaag cctcgccccg actgtgtcct ctgcgagtgt cccaacacaa tacaatctct
361 gtccatttct cgcgagagtc gcgtcggcga agcatgcgat acgctgcagg gtgtccgaga
421 cggccgtcga aggagaaaac attggactcg tttgagaaat aaatctttcg tcattaatat
481 taatatcctc tttcgggaac aacgacacgt tgagctttcg ccaaagagat atctagattc
541 ctatcgtccg tcataaaatc tgtcgctgaa agatgctcga cggttctggg acaccctgtt
601 gtagaaaaaa aaatgattta agcatcgaag gagaacatcc tggcgcgtcg actcgcctcg
661 cagtagagct cgtccgcaat gcgaacatga cgtatctcga acgtccaaga gatatattcc
721 tctctccgga tttgtgactt ccgaaaaaag tgaggcaaga tcgcgagaaa cgcgaaaggc
781 gggcttgaac gccgattctc gagagagtac tttgtgaggc aaaagaaaaa aaaattacat
841 ttattcgaac gacttgccaa gttttgttgc ataatgtacg cgagataaag tcggcaataa
901 aaataatcat acaaaaaaaa gaaggttaat aaaacggttg atggatagga atgatctggc
961 gggatttaac ggacataagt tacatagcta ttgtgagcag ttttcacgaa atattgatgt
1021 atatatctta agtttgtatt ataactctcc ccacacttaa tttgtatgaa atgaagaatt
1081 tcgaacatta aaatcatgaa tgaaaaaaaa aaaaaaaaaa
//