LOCUS LJ604637 1878 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c63240.graph_c0_seq2.
ACCESSION LJ604637
VERSION LJ604637.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1878)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1878
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c63240.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 726 a 275 c 322 g 555 t
ORIGIN
1 gattccacgt catcgttggc ttgtgtcaac ttctcttgta tagagagaga ggcttctttt
61 attacattaa cgtatatatg tataaagaaa caaaagaaag gtgcaaatgt ataaaaaaaa
121 taatacatac ggaatataag tgacattatt attattactt gaataaattt gtgattccga
181 acatacacgc aacaagtgaa cccgaaatat tgcgtcatac aatttggtcc cgttttcata
241 cgataaagta ctttattaaa gatcaataat taattagttg agtagagagc tgtcgaaaac
301 tgtcataatt catcaggcgc aagaagaaat agatttttta tgtgtgagaa attaaagagc
361 catattgctc cattttctgg tcagaatttc atcaagattt cgggacacag tttttattgc
421 ccatttgtga ataactctat attaaaattt taggatggcc aagtcaccaa ttagtttact
481 ccaagaatta tcaattaagc agggatatgt tcctatttac gaatatgtgg gtgtaaagac
541 agatggagtt tacaatcgat tcgtatgtag agtagattgt aaaaaattca atgctgaagg
601 tgtaggaaat accaaaaaag atgctaagca aaatgctgca gagaatatgt tattattact
661 ggcccaaaaa aatgaaattt cattatctcc agttacaaat aaagtaccaa tctctacacc
721 gacaaaaatc tgcgagccaa catcaccatt aagaatagag gctcaatcga gctctaatca
781 tgttaactat gttgggaagt tgcaagaatt atgtgcacaa cagttaatga tcaaagatat
841 tttgtatgag gttgttgacg aaagcggacc acctcatatg agaaacttta cgatagaagt
901 cagtgtcgga tctacacgtg aaaaaggtac agcgcaatgt aaaaaaactg ctaagcaaga
961 agctacaaaa aagatgctac agcgtctaca tcctataaat aaagtattgg agggaaataa
1021 cgaagcaaat tcaaagcaat tcaacaaaga agtgctcgag gaaactatgc gaaaattagg
1081 tatagaaata tcagaatgcg tgattagcaa gccaacatta ccaatcagag agatatcgaa
1141 aaaggcacaa ggattgtatc tgaaatgtac gaataaggaa cttaaaatga ccaggcagga
1201 ttatctactc aacgatcttc ataattcatt cgagaaagct tattccacta aaatttccta
1261 taatataaga aaaaaaatgc aaactgtacg ggacatatac acaaataatg cagctataat
1321 acaagaagtc gtacaagata tcgagagggc attggaagtc aaaatagaaa aagttatttt
1381 acctagctta acgaaatcaa actacatgat aagcttacgc ctgttatccc gtcctattat
1441 tacacaatgc ggcatgggtg aaactaaaca taaagcagag attcaggcaa tgtataacgt
1501 tattgtaact attttaacac ttttaaacat ttcttaatgt atagatgtat agaataatgg
1561 tgtacatgta aagagatagt taaaaataag aaatgaccat tttttttagt tatagcattc
1621 atatgtattt ttaagtaaca gacttgagat tttaatgatt gtgaaattgt aaatgtatat
1681 attatttcat atattcaatt atttactttt tgttaataaa agtaattgca agatacaaga
1741 ttgttataat aaataataga gatcccacaa aaatattgtc attatcattg aaaaaaaaaa
1801 aagaaaacgc actgtcacat tttaagttta tattttaggt tatgaacatt ttttatccgc
1861 atgcgcgact ttcgacta
//