LOCUS LJ602894 2137 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c62772.graph_c0_seq3.
ACCESSION LJ602894
VERSION LJ602894.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2137)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2137
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c62772.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 649 a 335 c 351 g 802 t
ORIGIN
1 gattcgcgtg gttctggagc aacgcgaaca acgtgatcgg tggtttgtcg acgtgatgac
61 gtcagatcac gaagcataga tcaagaacgc gttttaaaga cgagtagggc gtgaaattgt
121 gcgttttctt gtgcatcgaa tggaagtatg ggcgagtaat agtgcgagaa cgtggctgtc
181 gttttatcca cgggataatt atgctcggtg ctgttttaac gtgatcgaca gtgaatagtg
241 taccatgttt cgctgcattc cgatttttaa agggtgtaac aggcaggtgg aatacgttga
301 caaacgtcat tgctctctgc cgtgtgttcc cgacgatatt ctgcgatatt cgaggagttt
361 ggaggagctt ctattagacg ccaatcatat ccgtgatcta ccgaaaaatt ttttccgact
421 ccagaggtta cgaaaacttg gcttgagtga taatgagata caccgtttgc caccggatat
481 ccagaatttc gaaaatcttg tagagttgga tgtgtccaga aatgatatac cagatattcc
541 tgaaaatatc aagaatttac aagtgctaca ggtggcagat tttagcagta atcctattca
601 aagacttcca gcaggatttg tacagctaag aaatttaact gtacttggac ttaatgacat
661 gtctcttaca cacttgccac ctgattttgg aagcttggaa gcattacagt cactggaatt
721 gagagaaaat ttactcaaat ctttgcctga atcgctttcc caacttttaa aacttgaacg
781 gttagatctt ggtgataatg aaatagagga attgcctgcg catataggac atttaccagc
841 attacaagaa ttgtggattg atcacaatca gttgcaacac ttgccacctg aaattggtca
901 actgaaaacg ctggtgtgtt tagatgtttc ggaaaatcgc ttagaagatc tccctgacga
961 aattggcggt ttggaatcat taacagattt gcatttatca cagaatgtta ttgaaaagtt
1021 acctgatggg cttggtgaat tgaaaaagtt aactattctt aaaatagatc aaaatagact
1081 ttctactctg aacccaaata taggaaggtg cgagaattta caagagttaa ttcttacgga
1141 gaattttctt ttagagttac caatgtctat aggcaaactc cacaatttaa ataatttgaa
1201 tgttgacaga aatagcctgc aatctttacc gatagaaatt ggtaagataa taagatatat
1261 aatatagatt tttattgtaa gcaatattga atatgcaaaa gcaaattttt aattaatata
1321 gaaaaaagtt tattttcttt tagcgtgcgt ggattttata ttataattta attatatatc
1381 catccttaat ttgttggtta attaattttt ctataaattt cttatacctg ttaatttaat
1441 ttgctacatc taacccatct tagaaacttt acttttttgc ttactattat tttttttttt
1501 ctcttaccat taatacatct attttattaa tttttttaaa ctgcgaacat tctattcact
1561 tattcttgaa tatttagtct gtctcattgt tgttcctatc accttatctc atttagcttt
1621 tgtgccaaat aaacttgtca atttatttta tttcttatcc aatccattca gccttttaat
1681 tcattgacta cttaagcgat ccatgctttt ctttatactt atttaattat taaaatttaa
1741 ttttactttg gcatgttgtg agattatatt tttatttaca aatattcttc aattttttct
1801 ctaattcttc ttttatatta aaacatccta atatttctcc ttttgccttt tctttacttt
1861 aaaaaaattt ttaagtttta gtcttaaaat ttttaatttt tagtctttat ttagaatttg
1921 tcttttttac attatactta tcactttatt tcttttattt atgattttta tttataattt
1981 gtaacgcgaa aattatttag acgctaggac tgtgctatcc acaaaacgtt gtttttaaaa
2041 tagtgtttgg gcttatttta tttttattaa agcttatttg tatcatgttc ataacagcag
2101 ctacatgcaa tttaattcaa caaaaaaaaa aaaaaaa
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