LOCUS LJ602892 1106 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c62772.graph_c0_seq1.
ACCESSION LJ602892
VERSION LJ602892.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1106)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1106
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c62772.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 346 a 145 c 111 g 504 t
ORIGIN
1 attttatttt gggcagagtc cctgataaag atacgaaatt agttaaagat agaaattcat
61 ttattttatg tttcaggtgc gagaatttac aagagttaat tcttacggag aattttcttt
121 tagagttacc aatgtctata ggcaaactcc acaatttaaa taatttgaat gttgacagaa
181 atagcctgca atctttaccg atagaaattg gtaagataat aagatatata atatagattt
241 ttattgtaag caatattgaa tatgcaaaag caaattttta attaatatag aaaaaagttt
301 attttctttt agcgtgcgtg gattttatat tataatttaa ttatatatcc atccttaatt
361 tgttggttaa ttaatttttc tataaatttc ttatacctgt taatttaatt tgctacatct
421 aacccatctt agaaacttta cttttttgct tactattatt tttttttttc tcttaccatt
481 aatacatcta ttttattaat ttttttaaac tgcgaacatt ctattcactt attcttgaat
541 atttagtctg tctcattgtt gttcctatca ccttatctca tttagctttt gtgccaaata
601 aacttgtcaa tttattttat ttcttatcca atccattcag ccttttaatt cattgactac
661 ttaagcgatc catgcttttc tttatactta tttaattatt aaaatttaat tttactttgg
721 catgttgtga gattatattt ttatttacaa atattcttca attttttctc taattcttct
781 tttatattaa aacatcctaa tatttctcct tttgcctttt ctttacttta aaaaaatttt
841 taagttttag tcttaaaatt tttaattttt agtctttatt tagaatttgt cttttttaca
901 ttatacttat cactttattt cttttattta tgatttttat ttataatttg taacgcgaaa
961 attatttaga cgctaggact gtgctatcca caaaacgttg tttttaaaat agtgtttggg
1021 cttattttat ttttattaaa gcttatttgt atcatgttca taacagcagc tacatgcaat
1081 ttaattcaac aaaaaaaaaa aaaaaa
//