LOCUS LJ602863 1747 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c62252.graph_c0_seq2.
ACCESSION LJ602863
VERSION LJ602863.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1747)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1747
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c62252.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 616 a 280 c 249 g 602 t
ORIGIN
1 tgtaaattac gtttgtttta tataccccat aaatttttat ttatagaata attgttagaa
61 ctttacagtt aacttgtgtc cataagaaca gtcgcgttaa tatttactga attattttaa
121 gaaaacgaaa tagtattatt ccatctctct cactcccttc tctcttccat aaattttgaa
181 tatatttcaa tttaaacata ctttctttca attacacgtt ctttgatgaa ttaatttaga
241 acatatccat ttgtattaat atctatttaa tatctagaac agttatattc tatttataat
301 atttttcttt taactacagc ttttactcct tttagttttt cgttaaataa tatacacgac
361 aaatttcttg attttgttct ataaaacaac aatttttgac ttgtaattgt tttattcaat
421 tgttttaatt ataacagaca tttataacgt ttttattaac aaagagataa catattataa
481 aagactaatt tttgttgtaa ggtaaaaact cgtacacata gcttcaataa cgaaaaatat
541 gtcatggtaa gtttgaattg aatttatatt atctaataat aataaataac aaagaaagat
601 aattgaaata tattacgata caatttatta aactaaaaat atacgtagtt tatttgttca
661 tcaattgtaa cacgactaac aatagaataa ttgctttcta catatattac aaatatgtaa
721 gtatggtgtt gttacatgga ctacaaataa attaatctta acaagtggac gttgagattt
781 tatttattcg cctaccacat gtgtgattgt aaaaactgta cgaattttta tctcaagatg
841 cattatatgc gtttcttgat tcttaggttt aatacagtat atgctacaat atccagagca
901 atgcatgtta atatcagtat tgtcatatta aaccaataat ttatatggtc catgcccaat
961 tctatgagaa attttttagg agttgtgaaa tggcaatagt ccgctgaaca cttcagtttt
1021 gcccgatcat agccataaat agtcatcaat agtccttcga aagcatattt acaaaacgat
1081 atgtcaaaca gccaatgtaa ataagggtgc acatctttag tatgcacgaa gaagccactg
1141 aggataacaa acggcataat tgcaaacggt ccaaaaatta cgctattctg gacctttaat
1201 gaacacccta tgatgagtcc agccgtttga ccaaccaagc tgataacgaa gcacatgagc
1261 gtgtataaag caagtcttct actttcatga ggctgatcgc tcatgtaata cactgtgacg
1321 gtataaatga aagtggaaat aaattgaacc agaaaatcgg ccaatttacc cgctagataa
1381 tacgatcgta ctttatacca acgattgaag tgctcacgtt ttagtatcgg taattccaaa
1441 ggaattgtga ccattgcagc actaaacgca ctatacatga gaaacataat gttgtaatat
1501 gataaattaa aattgtctaa aatataagca gcatcttgac cgattttgaa gtataatgtg
1561 ccaacgacta aaccaatcgc gaagtgcatt aagatccgtg agagcattaa gaccttatcg
1621 cgaaataatt taattgcgtt tcttttacta agaacaccaa gttgcttcca aaaattggcc
1681 ctgtaatgtg gaatttgtct gatttccatc tcgaaagaac ataatctttc agcaacccgt
1741 tgtgagg
//