LOCUS LJ601053 917 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c63126.graph_c0_seq1.
ACCESSION LJ601053
VERSION LJ601053.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 917)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..917
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c63126.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 326 a 139 c 128 g 324 t
ORIGIN
1 tcctaattcg ggtctttttt aattcacttt tcagaaagtt taaaaaaaac ccaaattaag
61 atcttttcca aaaaaatgtt taatttattg ataataaaat atagtattaa tatacatgac
121 acaacaacgt tctaatctat tgtttaattt ttccgcaaat gattatttat agacggttct
181 tgatttgtaa aatgtttttg tttaaaatta cattgtacgc tgcaaaatgc aatttttaaa
241 ttaatttttt cttagttaaa gctaattttt tcagctaatt ccctaaagaa atagtcggat
301 aatttctaca aaaagcgact ctacgtttca gggcggcaat ctaatcctag caagcgcatg
361 aatttctcta cgtccggcaa acagtcttgc agtaaaataa ttccttcaat tgtggaattg
421 ccgatgcttc attcggacat ttcggatttt cctttaacgc aagtaggcac agcgcgcatt
481 acgtcacagt gaccgaaata gaattttctc ataagaaatc tgactgtaca ttaagtctta
541 gagatccttc gataaaagcg acaaagtaga ttaaaaatgg cggatagaat ataatatttt
601 ctttctttct ctcataattg cattcgtaaa aagaatgttg aaacgatgat attacaccat
661 aatgttatac gtaataaaaa attcaaacac gcattaaaaa ttaatgaaaa tacgttaaca
721 tatgtatatt tgaattctgt aaaagaaatt acagttctgt caaaccaata cgaaatataa
781 tttatttaac aaaatgtttg tcggtaatac gtataactcc aacatcacct taaattactt
841 tgcgggatgt ttgtatgtat ctcttattat aaaataaatt gcgtttaaaa ttgaattgag
901 ttgaatttca ttgtgtg
//