LOCUS LJ599082 1527 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c61935.graph_c2_seq1.
ACCESSION LJ599082
VERSION LJ599082.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1527)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1527
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c61935.graph_c2_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 386 a 355 c 364 g 422 t
ORIGIN
1 tttttttttt tttttttcta ttttgtaaaa aatatacgca agagtttccg cgagagagga
61 tatatcgtgg gcgatgctcg agccgcgacg gaaccgcgct tccgcttcgg cgcttcgcgc
121 gatgtcccgc tttccgacac gccgaagcgt acttccgccg gctcgcggcg tcggaactcg
181 ccccttcgtg tccccgtgat tccggggagg attcacgcga ttctcgaaac acggtttggc
241 ggtaggatcg cggcgagatt ccgacgggct cgcgacagcg gaaaccgcac gggcgaacgc
301 gcccgcgtaa acgcgcgtgt gtctcgtgcg attctggaga aatggacaat tggaaatatc
361 tcgaatctat agcgcgaatc tcaatcgttc ctgattttta gaagaagaat taattcctgt
421 tagttttaat agtccgctat tagtatacct actgattcgt ctctgcatct agagagtagt
481 ttgaaaagtg gcatgggata gagttgtgtt atagatttct ttcctttttt tttgtattat
541 ttcccatctg ttgtatcgag attaattgag taataaagtt ataattattt atttaattaa
601 ttaaagtggc agcagttagg ccatgcggct cctatcatct agtcgtcttt gactcttggc
661 ttccttacgt agaatttaaa aacttttttc ctcctttact tattaaactt ctttatattt
721 tgagaataat ttgtattata aatgactttt aaagtttatg tattcatcga agcgcctacc
781 ctagcgatgt ctttttaatt aagattattt tttttctcag cggcctcctc cccctctctc
841 caaccgtctc ttagccatcg gcctaatgaa taccttcacc aagcttgccc tcggtgtacg
901 tggttattat tatgcaatga atatggagtg acggcgagaa ctttgaaaat ctcgcgcggt
961 gtcggccatt gcctgttcgc cgttccgcgg gtaaaaaata ttgtattcga cttgtctcgt
1021 ggagaccccg gtgaaaagcg acagtgcacc ctgcccccgg tatttacgtg cgatcgtacc
1081 gaggacctcg tccttccgcc gagaccgcgc gcgcgtgccg tataattctc atcctccttc
1141 ctatttctta aaattcggaa cctgattgcc acgcataacg acaagcccga ctaactagaa
1201 ttatccttaa cttgagactt tattcatcat catcattatc atcgtcgtca tcgtcggtgg
1261 atcggtccga gtgaaagccc aaagcgtacg atccgctcgc tatacaccgc cgcgaaagat
1321 aaagacagtc ggagtaggag agtaaaccag acgaagcgca gagggagaga aaaaaaggag
1381 agaggaagat accgaggaga gaaaaagaga gaaggaagat cttggcccac gggcaacact
1441 cgacatgtag agaccgaccg gctgtgcacg gcaaacgcgg agacgatcgc gcgagagagg
1501 agccaaaaga gagagagaga gagagag
//