LOCUS LJ598335 1621 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c61664.graph_c0_seq1.
ACCESSION LJ598335
VERSION LJ598335.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1621)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1621
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c61664.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 540 a 288 c 357 g 436 t
ORIGIN
1 ggcgtagaat acgagagaga aagggagaga gtccgaagag agcgagtgct aaacaaaacg
61 agaggtaaag gatcgacaat attcattctt gagacgaaac agaaacggat ctctcccggc
121 tttcttgcag gcttccgaga cacatcagga ctcaccactg gcaacacgtt gaatcatggg
181 acgcatagtg tcgctatcgg acttatcatc gacggtaaag atgtcggttg tggggggcag
241 agagaggctg gctctcttat acttggcagg agttaagggg ggatcggggc tagaattcca
301 attgaacacc tcgtacatgg acgaggacat tctcatatct gcgaacaaac cattcaacgc
361 aacgcaaata ttaggtgttc cgcgaaaaat gaggacaagg atgagaaaaa tggtacagga
421 aagcataagt tgatcagcgt gagttagata cagtgcgaat cgcacgcgtg ttgtttttta
481 tttttttatt attttatttt ccgtatacac ctcactatgc agaaccatca ccatgataag
541 tacagagcat aacatagaag agaagtacag agagaatccc cgtaattaaa aattatatct
601 tggttcctta aaaaaaaaaa aaatgtttta gttttcgttt caccttccag tggtttccaa
661 atgttgattc ttaaatgaaa aaaaagagag agagagagaa tatacgttcg gataggaaag
721 aatgtggatg aagatgtggc gtttacaaag tgtatgctaa ctgagcaatt tgtgtgcagt
781 atataaaagt aaaaaaaata aatgatgtcg cataaaaagc aaaacttgcg actcatatca
841 cggggctcaa aacgttctca agactcgctg tgtaatcaat ctcaagctga aaatacgtaa
901 tacgtgaatt cggctggcgt tcgaagggat tgccacaaga gtgtacatag aatagagagt
961 gtaaacctga aagtaaataa ccaaaagtaa aatttatgct atgggcaaga tcgtcggcaa
1021 attacaggtt ctaatggtgc tggacaatcg ttctttcatg cttcgcgatg tcgtgagcaa
1081 ttgtgtgaaa gagcttcgtg cggcagtgat ttcatacgtt tcgtaataaa atttttttaa
1141 tttattctat ttaaaaactc aaagacgcaa tttaattagt caacccactt aatttcgcag
1201 caaagcaatt taatcgcctc atctcgtcta ttaattttca taataattca tatattttat
1261 tttagataca attatttcgc atataacaat gataatgtaa tgataatgca gcgacaagta
1321 ggcagagaat cgtggatcga gttttatagt taagcacact ataaaatttt taccgcatct
1381 cgtggatgga gtctctccct actttaaaca gtatcgattg ccactaagaa aaatatatca
1441 aaggtctcgt gcgatcgtgc gtaaagtata ggttgcgaaa aggcactggg agtcgcttcc
1501 ttgtctcgtt tactcgacta gctctgagaa tcgacgtgac atagaaatat tctcgcaacg
1561 acgacgcgat taaacgacac gatccctcat gaatccgcga caggaagaac gattgtaggc
1621 c
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