LOCUS LJ598173 2121 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c61167.graph_c1_seq4.
ACCESSION LJ598173
VERSION LJ598173.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2121)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2121
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c61167.graph_c1_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 685 a 351 c 373 g 712 t
ORIGIN
1 tttattcgcg tttttctttc ttcttcttta tttattctat gtaacgagtg atattttgat
61 gcaaatgatg ttttttaatt tgtatttata taacgcacag aatattatgt gcgtacaata
121 ttctatgttg tacaacacat acaagttttt tatgtataat tacatctttt cagttgagta
181 atttaagctg aggacaaaac attaaataac tttaaagaat tcaatctttc ttgttttaaa
241 actaatatta ttcaaagcta tgattttgtg cgcgtctgtt cttatttgtc gatgtaaatc
301 ggataatcta aatgttagca aaatatattt aagaaaatga ccgcgtttat ttgtatattt
361 gtatgacaga attacacgaa tcatgtcaat cattttgtag gtcgcggtcg caacaggaga
421 cggagcagcg acgagagcgg cgaattacga ggtggttgaa tcgtcttcga cgatactgta
481 agtagtaacg ataataaaaa cgaaactcgc ataccgattg cgaaactatg actatacgat
541 aattctttat ttaccgatcg aatcaataaa tatcgacatc aacaaatctc gtgatgtaca
601 atggtacaca cgtaaaatcc aattcgaatg gtgtttcagt gtatagagat accgaagatc
661 tataaaatat ccgatgacat tgcaaacgtc attatgtatc cgcacatact ttgtgcttat
721 aataatgaac gaaactgaac ttgatcggta ctcagttcct cgaatatcga aatttatgta
781 tctttctgtt gccaccttgt gtatatttga cgtttagatt gaatccttta gcgtttcggg
841 gaaaaaaaaa aggaaagaat tttgatctct gtgtatataa cttgacattt aatactactc
901 tacaagatta tcacgaaata tattagcatc tacgaatatt tatccgagtc attatcgtta
961 tgcggcttcg tatattttgc taagagattg ttgtcgatga aatgagcagt ttaaaattaa
1021 cacgctagtc gaaggcttgc aacaagaaat ttctctttcg tctctatttg catatatttc
1081 cttgtgttat tagaattcat aggcgcgcga cgatcgccta tacgtatata catgtatcaa
1141 tatactttat taaagatgtc gagatctttt ggcaacaaaa agtatcgagt cgtgcaatcg
1201 taggctgcac gatctttgag atttcaagcc ttcgcatccc gttctttcga atacacatac
1261 gtagtgaaat gtttattgaa atatttattt aaattattac actcttatga atattttcta
1321 aatgtcaaga ttaaaataga agttgttaaa attttcatgg aattatattt catgcttgag
1381 aggacgaata catagtactg ggttatagct taatgatcaa gagagacgtt ttattttttg
1441 ttgttgctgc aggcacaaat atcttgtaaa ttgcacggct aacttttcac atccgttctg
1501 tatgttgtgt atgatttaca tttatcatcg agattcgagg aataatacga cgaatggagt
1561 gtcagtaata cagtttgatc ccgtagaaaa ggacaatgcg cgattctaat attataatta
1621 ggacatgaaa atttctgtcg taaggcgaac cgtaacacgt gccttacaaa tctttgagtt
1681 aaagcaataa agtatatacc gataatagta atcgtatcta cttgaaatat aggcagattt
1741 atgaaaacgt tgaaggtttt agaaatcgac tatcgtcaat aatcgtgtta cgacgccaca
1801 tctcgcgtag cgtcgccgct tgtgcaattt tagtatgata gtcatattgg tagaatataa
1861 tcaacgatcg ttagatgagc aacgtacatg taagaatgaa cgacatgtct ttacaattat
1921 gtattatcaa gaggagcctg tttataataa aagtgtgaac gcgaatgcgc aatataataa
1981 cgcagtatca ttattctcct cgttaatccc atcagcgtcg atcctttttg tctatacgct
2041 aaatgtcaca tgtaataatt gaacaccata cactcgggca tgcacacgcg tgcacgtaca
2101 caacacacac acacacacac a
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