LOCUS LJ598170 1051 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c61167.graph_c1_seq1.
ACCESSION LJ598170
VERSION LJ598170.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1051)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1051
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c61167.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 317 a 136 c 153 g 445 t
ORIGIN
1 tttattcgcg tttttctttc ttcttcttta tttattctat gtaacgagtg atattttgat
61 gcaaatgatg ttttttaatt tgtatttata taacgcacag aatattatgt gcgtacaata
121 ttctatgttg tacaacacat acaagttttt tatgtataat tacatctttt cagttgagta
181 atttaagctg aggacaaaac attaaataac tttaaagaat tcaatctttc ttgttttaaa
241 actaatatta ttcaaagcta tgattttgtg cgcgtctgtt cttatttgtc gatgtaaatc
301 ggataatcta aatgttagca aaatatattt aagaaaatga ccgcgtttat ttgtatattt
361 gtatgacaga attacacgaa tcatgtcaat cattttgtag gtagtgaaaa tttatagtag
421 tattctcctc gggatctctt cgcgataatt cgctatacta atatgtacag gaatacataa
481 gtaggaaaaa taaatgcaac attttttcgg agtcttccat tgttgtgcgc aggtattaaa
541 gtacatgatg gttggcattg gatgatgtaa agctttatct gagttttatt gcattgggtg
601 tgtccctgtc caaatttctt cgtcaagtat aaaatatcgg tgaaaattaa cagaagctgt
661 ctttattttt attttttttt tttcactctg caaaccaata tctcattggt acttttaata
721 tttctgtgtt cttaagtgtt ttgtgtataa aaaatcgtaa gttattctgt tataatatct
781 aacacacatt tattatcatt attaatgcat ttcgcatttg ctcgatttga ctagaattat
841 tgtccaaaaa ttttttattg cgcgtgaata agttaataat gtgtagtttt cttcttttcg
901 ttgaaacttt attttcattc tctttattat atttatttaa aacatttttt cagagatgtg
961 ccatttatta attgctgttt taaacaatgc atatattctg gtttactgtc cttaaaatat
1021 atctggtaaa tgctagatta tatcaaaata a
//