LOCUS LJ597625 1176 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c62129.graph_c0_seq1.
ACCESSION LJ597625
VERSION LJ597625.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1176)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1176
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c62129.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 395 a 247 c 288 g 246 t
ORIGIN
1 cgatagcgac tatccgttag atcgtatccg aggcgggtga taattacgcg aactgctact
61 gcacatccaa tctaatcgtg gatatcgtca agagatggaa gattattccc aaggaacgat
121 atgtcaacga cgttccgtta atgacggcaa tagcaataaa atgcagagat taccgcgcgt
181 caccgatcga tggacacggc ttattgtatt aatcgatact tcaccgacga tcctactttc
241 gcgcacttat ttttcacatt ttaccacagt actccgccag acagatatct cgtcgagatt
301 tgaatccgac accggttttc cgttttgcta cttacgtatc gatgtccttt cgttagaccg
361 tcagtctcag tttttccccg caagaaacac acagacttta cgacagaatg taggatagaa
421 ttaacgcagc gattacgcgc gtcccgcacg atatgcgatg cgtcgtgcaa taaaaaaaaa
481 gggggaggac tacttttgca gcgtacacgc accttctttc aacgacataa agcgaatcga
541 ttcctcgttg cagagtgcca tagtatgtcg attgcagaat agtaacagaa ctcaatataa
601 taccaatagt aaacgactta agtttccaat acgtcataat acgctgtaca cgcagtacat
661 atcctacgat ggacggcgat tttagtagtg cggcggcatt acgattccaa gtgatgcgca
721 tcgtacttcc gaggacgaga tactgggaag gactggaaga aagagcagag agacgggacg
781 agatcgcaca agtacgaaga acgagatgcc acgccgggac gagagaaatg atcgctggtc
841 ccgtcagatg agcggagcat accgacgcga tcgaacgcgt agtacgggaa gaagagagaa
901 agcttaaaaa aaaaggagag aaaagaaaga aagaaaaaca aaatagaaaa aaaatttgtc
961 acacatgacc gtgtgagccg acgcaggcga agttaaaaac gcccaagata ttgacttacg
1021 aaaacgaatc agaccttgcc acttgcaatt cgttgaagac gtgacgcgtt ctaagcaatt
1081 cgcataacgg aaagtgaaaa aaaaaagagc gggtacgtaa gaaggagaga aaggacggga
1141 gcgaaagagg agtgtaaaag ggaaagagag agaatg
//