LOCUS LJ593373 1222 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c59742.graph_c0_seq1.
ACCESSION LJ593373
VERSION LJ593373.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1222)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1222
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c59742.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 382 a 231 c 259 g 350 t
ORIGIN
1 ggtcacacac cgcgcatacg tcggcgaacg tcgctgaacg tcgcggggga tacggggatg
61 tacggggata cgtaacaacg cgcgtggacg ccgcggacgc agcttctcgg acgtgctcgg
121 acgtacacgt acgctcgcat acggtgtgct gtcgggcagc tcttccttca tctcctctgt
181 tgtactctcg ccgagggaat cgcacgggcg gtgacgatgg caccgaagca gcggatgcgc
241 atcgcgaacg agaaggcgac gaagaacatc acgttacgcg gaaacgtgcc caaatcgacg
301 aaatcgcaag aggagggatc tccagttgga ccttggctct tagctctctt cctctttgtc
361 gtgtgtgggt ctgccgtgtt tcaaattatc cagagtatca gaatggcttg aacaaagctg
421 aaaagggaaa ggaggcgcta ctgttgatct tcatacctaa gaaactatct acaattcggc
481 gatatgcgaa agagactgac aaaccatttt aatatagatt ataaaaaaga ttggagatta
541 cgggaaacga aacgtgaaca aaaaatttag acagtagcta aaaaaaaatc atttctcttt
601 tgcggaaaaa gctcaaagat ttatttataa taacttagca tttataagcg tttaacttaa
661 ttgcgctacg catagacgaa aggagaaagt gctcgaatca gacagagtgt ctccaacaat
721 ctatcattct tgtgaatcgg aaaagaaaaa attaatttgt ttatatttaa atttttattg
781 cgtttcaaac gatgttttgg tttatgcagt tgtctacact attttttccg aaatgtattc
841 tttcgtctat gtgtatgtag taaacaattg tatatatata tacacataaa tgatttatca
901 tgcagatttc tcctcaagca gatctatcca attggcagca cgtaagctcg actccgataa
961 ttggacagat ctgtcttaaa gcattccaat gtaagcagtt ggtagctttc tgttattata
1021 atggcctttg tatgatgctt atatgttaca taggcaacac atgcgcagta ggtcattata
1081 ttcatataca aatatatagt atacatctca aagaatgatt tgtctatatg aaatatttgc
1141 tactgacagt gcacacattg tctcttttaa taaagtatat tatcaataaa gatatatata
1201 ttgttttaaa aaaaaaaaaa aa
//