LOCUS LJ591346 1299 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58756.graph_c1_seq1.
ACCESSION LJ591346
VERSION LJ591346.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1299)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1299
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58756.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 433 a 234 c 272 g 360 t
ORIGIN
1 acccagattc gatcgaatca ttatctctat accgaacgta gcaccatgca cgtgatggcc
61 gatttgtcgc gcaaggacga gcccggcgcg accggcattg ctgccgccgg gtcgacggac
121 tcggagacgc tgctctgcac ggtgatttac gacaaggcgc gcaagctgtt gacgattagc
181 cccgatttca cggtcgacga cgagcacgaa cggcattaca acgtcaccaa cggttacggt
241 gtcagattta attatcgcat cgagcacgtt tccgaggagc gaacggcgct ggaattgcag
301 gagcaccgcg aggacgcgcg ccgtgaagta caacagcaac ttgcttacaa agaaacagag
361 ttgtacaagg aattacaatt accaccagcg ggtttatcta cactattcat atgcttggat
421 attgcgtcag ctcacggttt ttcttacgac ggattgttcg ttacctattt catcgatttg
481 ccacaacatt ggagtacaaa acaaaaagaa agattatttg gcagaactca gaaaagccgt
541 ttagaaaata gaacggcgta ttttagttat tgtacagaca tatccttgca tcatccgtca
601 aatgaatttc aacaattaag cgacgatgca ttgtcacgtt ggcctcgttt attgctctcc
661 gcagcatctc tggatagttg gaccaggtat cgaatagaag gttacgcagc attgccaata
721 ccaatgacgc ctggcagata cgaatttaca gtttctacat ggcgtgcgaa aggaagtatt
781 attgatacat tgagacgatt ttttgttggt ggttcttacg agctcgagga tataacatat
841 tgtggtattc caatgaatca cgagggcaaa attttagata aatcaaactt gaaagtcgta
901 ccgagtggga atattaaaat ttatatgaat gtaatacttc aaagtggtaa acatttcaat
961 catcaaagag atgactcgga taaagttagc accgatacac ttgtaaataa tgttgaaaat
1021 gttcttgaac aatttaaagc ggctaaggaa cgcatgatac gaatacgagc aatgaattct
1081 aagcgataaa ttattttagt aataattaag aagactgaat agaattagta ttgagacttg
1141 atttcatatc aaataatata tttaaaatta tattgtaagt gaaaatatga tataaagtta
1201 attttgtatg aaatacaaaa aagatatgag ataattttat attatctgtg tataattact
1261 aataaattat aattatgtta ttataaaaaa aaaaaaaaa
//