LOCUS LJ591296 974 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58527.graph_c0_seq1.
ACCESSION LJ591296
VERSION LJ591296.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 974)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..974
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58527.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 279 a 173 c 220 g 302 t
ORIGIN
1 gccactgcct gtcatgcggg aagcgcaatt cgcttccttg gagattatac cagccggtgt
61 cggtttcctg gatcggcccg tttattcgcg gggttggtgc cgcgcgtttg cgccctcatt
121 taaaaaaaaa actcgtcatt ttttattcgt tcgacgactt tgatagggag aagtctttat
181 ctagaggttt ttgatgacac tagatttctc gtaaagccct tagcaaatgc atggttgttt
241 tgcaaataaa tgcttactct tatagatagt caacaatcac atggatcgtt catcgatcta
301 cacaatagat gacagatttt tcgcctttag aatagtgatc gataagcggc acgtgttcga
361 actagtgact gtttttcgct agcaataaac gttctgaata aacgtaatta acattatcga
421 caaagtttct tggatttttg tattctgctt aattcacaga gatgtaagaa tttaaaccgt
481 aaaacttcct agagggatct atatatgtga aaatttccaa tatcaactcg atttctttat
541 tataataatt cttaaggtat gacataatga tcattgggtg agttagtgag caggctgaat
601 tttccacttg gaacatcgtg tatcacttac gtgtaattgc atgtattatg tacatttgtt
661 atcttttcta ttaatttgta tcgacagtgg atttcgagag ataagataca aatcgtgcgg
721 tttgtgctga cggcgcaaat tcaagattga cgggatctcc ctctgtataa aaaaagaaat
781 taacgaattg gtaggttgat cgatcatgtg ttcgtgattc gatgtgtgga actgcgcgcg
841 agaaggaaag ggatgtgaaa cgaaggtgcc agtccgagaa gaagtcgcgt aactcgcgtt
901 ccgttcgcga tcggaagatc cggtcttcgg gcgcgtcgcg acaaaacgtg ttcgggaaaa
961 aaaaaaaaaa aaaa
//