LOCUS LJ591132 1956 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58454.graph_c0_seq1.
ACCESSION LJ591132
VERSION LJ591132.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1956)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1956
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58454.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 623 a 350 c 414 g 569 t
ORIGIN
1 ggtatcaaca cagattgcag aaaccggttc gttgcatgct ggatagagac gaagacatga
61 tgataagtgg aacgcgacat ccatttttat tcaagtacaa agttggattt gataacgacg
121 gtcgtatcaa agtggcgaaa gtatacatat ataataatgg aggcatctct cacgatttat
181 cagtatcggt actggaacgc gccatgttcc attttgaaaa ttcgtataaa attccagtgt
241 cggaagtata tgggtacgtg tgtaaaacaa atttgccatc gaatacagct ttccgaggtt
301 tcggtggacc gcaaggaatg tttgtagctg aaactgtcat acgacaaatc gccgattatc
361 tgcatctgga tatcgtcaag ttgtccgaat taaatttgta caaggaaggc gatttaacgc
421 attacaacca acaattggtc aattgtactt taaatcgctg ctggcgcgag tgtctagcgt
481 cttcccatta taacgaaaga atagtcgagg ttcaacgtta caatagagaa aatcggttta
541 agaagaaagg actcgcgatt gtgcctacga agtttggtat agcgtttacc gcattattct
601 tgaatcaagc gggtgcattg gtgcacatct acaccgacgg ttcggtgttg atcagtcaca
661 gtggcgtcga gatgggacag ggtttacata caaaaatgat tcaaattgcc agcagaatgt
721 taaaagtgaa tcctaccaag atacatattg ttgaaacggc taccgataaa gtccccaata
781 catccgctac cgcggcgagc tgcggatccg atctcaatgg catggctgtt atgcgtgcat
841 gcgaggaaat catgaaacga ttacaaccga taataaacag taatccggaa ggtacttggg
901 aggaatggat aaaactggcg tattgccaaa ggataagttt gtccgctact ggtttctttc
961 aaacgccgaa cattggatat tccttcgaaa ctaatacggg aaatcccttt aattatttca
1021 catatggcgt tgcttgtaca gaggtggaga tcgattgtct taccggtgac catgaggttt
1081 tacgaaccga cattgtcatg gatttgggag agagtttaaa tccagccatt gacataggac
1141 aaatcgaagg tgctttcgtt caaggatacg gtttatttac gttggaggaa atgatttact
1201 cgccaacggg aattttattc agtagagggc ctggcgcata caaattacca ggctttacca
1261 atatacccca ggaatttaat gtttccttat taaaaggaac ttctaatcca agagcagtat
1321 actcttccaa ggctgttggc gagccaccac tatttttggc atcatctacg ttttttgcca
1381 ttaaggaggc aattaaggct gcgcgtagag atatgaatat tcatggttat tttagactcg
1441 atgcccctgc gactgcctca cgtatacgta atgcctgcat agatgattta acaacgaagg
1501 ttgcagagcc tgatattaaa cggcaatgga atatagtgcc gtgaatcgag tcctcgagtt
1561 gcgctttgac tgtttcaagg ataaaaaata ttaaagctgt cgatataaca attttatttg
1621 tatatccgtt tttatcgtcg agtcaaatct ctcccgagtt atcatattag aaaggtatac
1681 gattttagag ataccctctg taaaataata gtttaatgtt ggaccaaata aaaagtttac
1741 aaattttttt attcaattag tagccaataa atcgtttcga ttttatttcg atagagaaaa
1801 atattaatcg acaaagaaag aacgagagta tatcgtcgaa caaaatatag aaatttacga
1861 gcaaacttaa aatttaattc ataaaattag atttcacaaa acagaccgag taaaaaagta
1921 atcttttaaa aatactttct taaatatttt tattta
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