LOCUS LJ590770 2023 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58799.graph_c0_seq4.
ACCESSION LJ590770
VERSION LJ590770.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2023)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2023
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58799.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 653 a 379 c 360 g 631 t
ORIGIN
1 ggggatcgcc aggatgaccg cagattggcg cagatcgctc tcagtcattc gtggttactt
61 gatcactctc atagtcttct ctgatacata tctacatttg aaatcccatt gcacaaggat
121 caatacctac ggaaactccg gcagattact ttgagcaacc taagagaacg aatgacggct
181 gaaatggatt tccgcaatgt cactcattgc atcttcgata tggatggttt attactggat
241 acggaatccc tatatacgat ggcgtacaat tgcgtcactc aggaatatgg aaaaacatac
301 acctgggagc acaaggcaaa gatcatgggt tttaaaagcg tcgaggctct gaaaactata
361 atagatctgt tagagctgcc aattacgatg caaacatttg aagaaaaact tgctcctata
421 taccaggaag tatttcctcg atgtgatctc atgccaggtg cagagaaatt gttgcagcat
481 cttaaaaagc ataacgtacc tattgcgcta gctacaagtt cgtgtgagga gagcagcaat
541 ttgaaaaccc agaaatggaa atacctgttt gacttgttca gccacaaagt ctacggtggt
601 tctgacccag aggttgtcca aggaaaacca catccagata tattcttgat tgcagcaaaa
661 cgtttccctg acaatcccga tccattaaag tgcctagtct ttgaagattc accgaatgga
721 gtacaggctg gtcttactgc taagatgcaa gtagtgatgg tgccggaccc tcagcttcct
781 aaacacctca ttggagatgc tacattggtc ttaaaaagtc tagaagattt caaaccagag
841 gactttggat taccaccgtt tgtagcatga aattatttgt cttagcttat caaggagagt
901 atagagagac gagttagatt ttatttcatg tacttaaagc cagattatga ggcataatta
961 tcgacgaaaa agataaaagc ctgcaggcag gttttcttta gcgcagatgt gaaatctgac
1021 tgatatatag attaaaaaaa aaaaatgcaa gtattatgtt ctgaagatgt atattttcat
1081 acagcataga gaggcaatta tcacactgcc tgacatttat ataatgtgat taaacctata
1141 tccaattata tatattgtat ttatacaata gaaatcttgt gctatttatg ttcattacag
1201 cataaagttc caattataga tatatttata tatattagac gattaagtta ttaatttggg
1261 aatatttcaa tatttttttt ctattgtttt tcttagatta taattgtcaa gccaaacttg
1321 caaagaatat agcacatgct ataaaagatt aaccgcttga tatatacaca caaagaatta
1381 taaaaataaa tatttttctg ctatagaaaa tgaaaattct tcctacagtt tcataaaatc
1441 taatctatat atacctccag catacatgtt atgcatacaa ggtataattt gtcaagactt
1501 ctgtgaacga ctttaatcta ctctcatttg aaactgatat aactatttta ttttacaaca
1561 ctatacatat tatgatacat atttataaaa tatttatttt tgagatgcta attcttgaac
1621 ccttccgagt acttcttcag atttcagatc tgacaggggc acgcaacgtt ctacaccgta
1681 ttcataacgc gcgtacaatt tcggttcgat cgacgagcat tctctaatca aaacaggaaa
1741 tctcggatta tttttcttca acggcacata ttgttgctcg atgaagtctc taacaccttg
1801 actagatttg gacgtttggc agaggaggat tctcagctct ttcaaatgtt tcccgaattt
1861 cacagtagcc atctctttcg attattaaaa tcttttaaaa acatacacca taaccataca
1921 ctttcatcac aattccaatc ctgtgcaatt tcgcgttaaa ggttggagtt ctattattat
1981 ggcagcggtc gagaagacgc tagagatgct tcgaagcgtt ttc
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