LOCUS LJ590769 2094 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58799.graph_c0_seq3.
ACCESSION LJ590769
VERSION LJ590769.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2094)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2094
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58799.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 679 a 369 c 372 g 674 t
ORIGIN
1 ggaccgtatc tatctatatc tgcatctgtt gaaatcggat tgcacaagta tcagtacaag
61 ttgccttatt acggaggaga aacgtgtccg ttagtcgtgt gcgcgtattc taacgtatct
121 ttcttagcgt ttttgtaata atcctttttc tcgaaataaa aaagtacaga gtatttttga
181 aatacaaatt tctacgagaa ctccggcaaa gtactttgga taacctagta gaaattaatc
241 gacggggctg tagaatgggt ttcgagaatg tcacacattg catttttgat atggacggtc
301 tgttattgga tacagaatcc ctgtacacga tggcgtacaa ttgtgtcact caagagtatg
361 ggaaaacgta tacttgggaa cacaaggcaa aaataatggg ttttaaaagc gctgaagctc
421 tgcaaactat aatagatatg ttacagctgt cgattacggt gcaaacattt gaggacaagc
481 ttgctcctat atatcaagaa gcatttcctc gatgtgacct tatgccgggt gtggaaaagc
541 tgctgctgca tcttaaagag aataacgtac ctatcgcact agctacgagt tcaagccaag
601 aaagcagtga tctgaaaacc caaaaatgga aaaacatatt caacttattt aaccataaag
661 tgtatggtgg ttctgatcta gaggtttccc atgggaaacc aagtccagat atatttttaa
721 tcgctgcaaa acgttttccc gataatcctg atccttcaaa gtgcctagtc tttgaagatt
781 caccgaatgg agtacaggct ggtcttactg ctaagatgca agtagtgatg gtgccggacc
841 ctcagcttcc taaacacctc attggagatg ctacattggt cttaaaaagt ctagaagatt
901 tcaaaccaga ggactttgga ttaccaccgt ttgtagcatg aaattatttg tcttagctta
961 tcaaggagag tatagagaga cgagttagat tttatttcat gtacttaaag ccagattatg
1021 aggcataatt atcgacgaaa aagataaaag cctgcaggca ggttttcttt agcgcagatg
1081 tgaaatctga ctgatatata gattaaaaaa aaaaaatgca agtattatgt tctgaagatg
1141 tatattttca tacagcatag agaggcaatt atcacactgc ctgacattta tataatgtga
1201 ttaaacctat atccaattat atatattgta tttatacaat agaaatcttg tgctatttat
1261 gttcattaca gcataaagtt ccaattatag atatatttat atatattaga cgattaagtt
1321 attaatttgg gaatatttca atattttttt tctattgttt ttcttagatt ataattgtca
1381 agccaaactt gcaaagaata tagcacatgc tataaaagat taaccgcttg atatatacac
1441 acaaagaatt ataaaaataa atatttttct gctatagaaa atgaaaattc ttcctacagt
1501 ttcataaaat ctaatctata tatacctcca gcatacatgt tatgcataca aggtataatt
1561 tgtcaagact tctgtgaacg actttaatct actctcattt gaaactgata taactatttt
1621 attttacaac actatacata ttatgataca tatttataaa atatttattt ttgagatgct
1681 aattcttgaa cccttccgag tacttcttca gatttcagat ctgacagggg cacgcaacgt
1741 tctacaccgt attcataacg cgcgtacaat ttcggttcga tcgacgagca ttctctaatc
1801 aaaacaggaa atctcggatt atttttcttc aacggcacat attgttgctc gatgaagtct
1861 ctaacacctt gactagattt ggacgtttgg cagaggagga ttctcagctc tttcaaatgt
1921 ttcccgaatt tcacagtagc catctctttc gattattaaa atcttttaaa aacatacacc
1981 ataaccatac actttcatca caattccaat cctgtgcaat ttcgcgttaa aggttggagt
2041 tctattatta tggcagcggt cgagaagacg ctagagatgc ttcgaagcgt tttc
//