LOCUS LJ590768 1499 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58799.graph_c0_seq2.
ACCESSION LJ590768
VERSION LJ590768.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1499)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1499
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58799.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 485 a 254 c 279 g 481 t
ORIGIN
1 ggggatcgcc aggatgaccg cagattggcg cagatcgctc tcagtcattc gtggttactt
61 gatcactctc atagtcttct ctgatacata tctacatttg aaatcccatt gcacaaggat
121 caatacctac ggaaactccg gcagattact ttgagcaacc taagagaacg aatgacggct
181 gaaatggatt tccgcaatgt cactcattgc atcttcgata tggatggttt attactggat
241 acggaatccc tatatacgat ggcgtacaat tgcgtcactc aggaatatgg aaaaacatac
301 acctgggagc acaaggcaaa gatcatgggt tttaaaagcg tcgaggctct gaaaactata
361 atagatctgt tagagctgcc aattacgatg caaacatttg aagaaaaact tgctcctata
421 taccaggaag tatttcctcg atgtgatctc atgccaggtg cagagaaatt gttgcagcat
481 cttaaaaagc ataacgtacc tattgcgcta gctacaagtt cgtgtgagga gagcagcaat
541 ttgaaaaccc agaaatggaa atacctgttt gacttgttca gccacaaagt ctacggtggt
601 tctgacccag aggttgtcca aggaaaacca catccagata tattcttgat tgcagcaaaa
661 cgtttccctg acaatcccga tccattaaag tgcctagtct ttgaagattc accgaacgga
721 gtgcaagctg gtatcgccgc caaaatgcaa gtggtaatgg tgccagatcc tcagcttccc
781 aaacacctca ttaaagatgc taccctagtc ctgaaaagtt tggaagactt caaaccagag
841 gactttggac tacctccata tgtagtataa aactatttgc cttagcctgc aagagaaaat
901 attagatgta ttagattctt cgtataaatg aagcaagtaa ttgtttacga aaatgaaacg
961 aaagcctgca ggcaggcttt tctttagtac taataaagtc tgactgatgt ttatagattt
1021 tgtttgaaaa aagatgatac aaatattatt ttctagagat gtatattttt gttcaatata
1081 gaggagtttt cactgcctga atttgaaaac ttgctaagta ggttgcatat atcgcataca
1141 aaagatctct gtgccatata tttattaata atcataagtt ctatagttat atagatatat
1201 tatttgttta tcataaatta tattgagtgt taagtttcga tgtcagaatt tagcctaata
1261 tattttttac attataattt tattttaagt tgaatttgta gagaacattg cagatattct
1321 tcaaaatatc attgttttga tatgtaaaaa ttagagaata ttttttgcaa gaaaattctg
1381 ataaattttt gtgtaatttt tcttaatgat ggtttttgta accttttaag tttaaaggtt
1441 aaaatcagaa ttatgtatgt aaaaaaatat tgatcttttg tctgatacat ctattttat
//