LOCUS LJ590707 947 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58170.graph_c0_seq1.
ACCESSION LJ590707
VERSION LJ590707.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 947)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..947
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58170.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 385 a 98 c 119 g 345 t
ORIGIN
1 atgatatctt gatgaggtaa aagagctcag tattgcatta tcataatata tataaaagga
61 tcaaactatg taataaaatt cagtcgtact gttaaaaatt aaataaatgt ttacataaat
121 taaactatta aatattaaaa gttacgaggc ttgagcttct attattatga tattttaact
181 tggaaaatca aatattttta tctttttaca gaaatgttga aaaaaagatt taaagagata
241 ttttaagtct acatgtgctt gttttgatgc aaatatattt aatccttaac tacattggcg
301 gagtataaac atatactcca tacaattatg caaatatttc tcgcgtggcg gaattgtaat
361 ctaagattac tgttatatgc aagaaaaata ttctaaaatt aacgctgtcg aaaatatttt
421 tgttacttaa ggtactacaa attttatttt ttattatatt tataatgatt atctttcagc
481 ttcagaatgt ttaaaccaga caaaaaaaat atctatatta tgaattttat ttcattaaaa
541 ttcatgtaaa atttggagta caaaactact tcgcaaatgt aattattttg gagtgtagtt
601 gagagttaat atgacagaac tttaatattt ttgacaagta cattatatat aataattatc
661 attgcgtgat tattttgaat tttagcctta ttttaaaaaa tttgtctaca ataggtctat
721 gaggaaggca aatgagaaaa taaaatgata aatgatcaaa atttaaatat tagacagttc
781 aagaattttt tttcaaaatc agtgttgctt ctattaccat aagagaaaag taaaaaaaac
841 atgagtaaaa taatattgca ctatattact aattaatgtt tagcaataaa atgaatcaaa
901 acacataagt cataaaatac ctatgaattg tataaaacat aaatcat
//