LOCUS LJ590632 1285 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58917.graph_c0_seq2.
ACCESSION LJ590632
VERSION LJ590632.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1285)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1285
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58917.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 527 a 204 c 266 g 288 t
ORIGIN
1 gatatattat gtaattatta tgaaaaaatc ataagttatc taaaaataat tgaagcaatt
61 atatataaat tgtattatac agaagaggcg ccaaatattg acgaagttgt tcggcgtgcc
121 aatgcagaaa tacaaatgga aaatagaaat ctacaggcga taaatataca attgcatgaa
181 aaatatcaca ctatctcatt aaagatgtca gaattgcaag atacaataac aggcaaagat
241 acgcttgcgg cagaattgcg aaatcaggtt gacgatctcc agtacgaatt gaacaaagtg
301 cgtgcaagaa acgataaact ggaacatcat ctcggagaag caatcgaaaa attaaaagct
361 tttcaacaaa ttcatggctc agatgagaaa ggcagtaata aaccgactac tatagttgca
421 tctagcgttt ctcagactaa gcttgacgat ttgcaaagag aacttgaaga aacgcgtgaa
481 ttggctaaca atagactgca agaattagac aaactgcatc aacaacaccg cgatacctta
541 aaagaagtag aaaaattgaa aatggacata agacagcttc ccgaatcagt aattgtggaa
601 acaacagaat ataagtgttt acaatcgcaa ttttccgtac tgtataacga gtctatgcag
661 ttaaaaacac aattagatga tgctcgccaa caattgcaat cgagcaaaaa tgcacatttg
721 cgtcatattg agatgatgga gagtgaggag ttaatggctc aaaaaaagtt gcgcggagaa
781 tgtatacagc tcgaagacgt tttagcacaa ttacgcaagg aatacgagat gcttcgtatt
841 gaatttgaac agaatttagc agctaatgaa cagacgggtc cgatcaatcg agaaatgcgg
901 catctaatta cttctcttca gaatcataat caacaattaa aaggagaagt gcatcgttac
961 aaacgaaaat acaaggaaac aactactgaa atacctcgat taaaaaagga agtagaagag
1021 ttgacaacca agttgggcca acaaacggcg caagaaaata aagaaggaaa taattcagat
1081 ggtagcggga aagaagaaga tgcctcaaat tcgttaccag gttctacaca gataaaagag
1141 gaaagtggtg ttgcgataaa aagggaatct ggtgctgatg aagaggtaga aactattgag
1201 gttggagaag gagaaggcaa taaaaacacg ccagattcgc taacgttaac ttcgccgact
1261 ctaaaaaagg aaaaaaaaaa aaaaa
//