LOCUS LJ590621 1529 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58923.graph_c0_seq2.
ACCESSION LJ590621
VERSION LJ590621.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1529)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1529
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58923.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 512 a 210 c 232 g 575 t
ORIGIN
1 ccctctaaat gtggcggcat gattcacttg tgtttcatcg aaatctgttt gcgataacag
61 tttagttatt ctatgcgtta ataattgtgt tttgaagcaa ctatttcgta gataaattgg
121 aattctcatc cagtactatt ctcccactac atatttgtaa aatgatctca tggccgtacg
181 tagagcgaga aagcgagtgg aagatagagc acacaacatt tttatctacg tatatgtcac
241 aggaacaaaa gtggcaactg gagaaagatt tcagaaaaaa tagagaagtt ctactataat
301 aattttatta atacataaaa ctagtcgtga ttaaatgtac agatcgaagg tattgttctt
361 tttcttagcg ataccacttg gctatgtttt catttcttca tgcgtcattt tcatccatgg
421 aaatcatttt acaattaaaa cgagtaaaaa ttaataggcg cgcatacatt tttattatgg
481 atttacttca attgaaagaa tcgttaaata tacgagatcc ggaggaatgg tttttctata
541 attaatcatc cggaatcaaa acgtggataa atatttcatt actcgcatac agatgtacac
601 gctgcacgat taaaatttta attgtaaatg tattttttat cattcatttg acttgtacag
661 atacgcacac gtataatttt caacgcatct attcatcttt tattcgattt cgagcaaaat
721 gcaaaattac tacttttgat aaatttatat tatatttttg cgataattac gttacattca
781 ctgatttagt aaaattgtac ttacattgta cttaatttag atgagtcgat atatttatac
841 gtatatagtg aacatcaatt atctggacat cgataattcg aacagcgatt tcttctaaca
901 tttgatgtct aaatgtatct aaataaaaat tcgtaatatt tttattttta cataataatt
961 tttatattca aattattttg tcgaatgtaa tattcatgtt ttgcttctct ttcttttcca
1021 tttgaaaatt gtttggataa ttcatgatgc attagttttt cgatttgtct cggtaattga
1081 tgtcttacta tagtatttac gttacaagtc tttatgattt ttaggaactt ccatatcttt
1141 gttttttata agcgcaaagt ttgctaagtt agatctgcgt taagtggatg atgttcattt
1201 gaaatttgaa taatgcatac ttagagtgat aagaatctta ctttccgtga aatttgcgag
1261 ctgtcgttga aacaccgaaa gtgatatttg tatacactgt tacgatgctt taaaataaag
1321 taaagcaata cgtaccatat taaagattct tgtacttgaa ttatatttga tattatatat
1381 cgtattgtta aaccattact tgtgaacaat tcattattat tttgaacatg tcaagcgttg
1441 tgaaatttaa actttggtga aaactgagaa gtttaaaaag aagtttaaaa taaaacgatt
1501 tttcgcggca aaaaaaaaaa aaaaaaaaa
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