LOCUS LJ590233 1105 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58881.graph_c0_seq1.
ACCESSION LJ590233
VERSION LJ590233.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1105)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1105
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58881.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 399 a 161 c 235 g 310 t
ORIGIN
1 gaggttagat gtgaaccttg gtcacgtcaa gtgcacagtg gaaaaacaat acgtcaagtg
61 gtctgattgc gagtgaaaaa tgtcgggacg taggaaaaag gacaagagca aattattgca
121 aagaaggcct cgacacgttc tcggcaagga gcaaaggtac catcagaaaa gagacagaga
181 atcggaggga tcggacaagg agaatgaaga gacagaaccg atagacgaat ggccgttacc
241 tttttacgtg gctatgtggg atctaaagca ctgcgatcct aagaaatgta ccggcaagaa
301 gttgatgaaa cataacttga taaagatatt gcgattaggc actctatttc caggcttgtg
361 tctaactcca cttggtgata agtatgtaac gtcgatggat cgcgagatag tgcaaacaca
421 tggctgtgcg gtggtggatt gtagttggtc acgtatagac aacactccct ttcataaaat
481 gaaaacatct cattctcgca tattgccgtt tctggttgct accaatccaa taaactatgg
541 aaaaccctgt gaattaagtt gcgtcgaagc tatagcagct actttaatta taactggatt
601 tccggacgaa gctaagctct atctcgaaaa atttcggtgg ggacactcgt tcttagaact
661 gaatggcgaa ctattggaaa agtatgctcg ttgcacaaac actgaagaaa ttatagcagt
721 acaagataag tttctaaaag atgctagaca ggagaaaata gacagacgtg cactttctga
781 ttttccacaa agtgatatgg aatctgaaga agaagaggaa aagaaagatc agaacatatc
841 tgaaataact aaagaacttg ccagtacaag aatataaagt gcaatattaa ttttagatat
901 ttaacaagta ttataaacac ttgtgtatat atgtgaacat tttgtatatt tggttggaat
961 aattactgtt tgattatatt atattatata gagaggaaga ttatgtatat aatatatata
1021 ataaattgta ttattataga ctaatgtaat acaataatat ataatataat atattgtatt
1081 attattgtat atatatatat atata
//