LOCUS LJ590217 1466 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58925.graph_c0_seq5.
ACCESSION LJ590217
VERSION LJ590217.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1466)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1466
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58925.graph_c0_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 509 a 221 c 256 g 480 t
ORIGIN
1 acgcagtaat cttatcacaa aaggtacttt tacaattttt gcatcgtaga agtaagttga
61 attttacaat ttatattgcc tataaatata atgcctatta ttacagatat gatgacggaa
121 ttaaatgttg agtacaataa tttatttgtc tcgccaacaa agagtccaaa atatcacaat
181 gtagaaatta aaaaaggaaa tgaagatttt gaagcagacc attggccaaa gatatcagac
241 tgtgatagtt ctatgctaat gtttggagat ggaaagcaat atttacctat ttatttagcg
301 cctgaaaaca aaggttacgc gacacatttg tttgtaaatg aattgattga tatagaacca
361 tggaaaaagc atccattacc atggcatcca ccgatatgcc aatcatctaa atcgtttaat
421 gagcgttata ttacacatac gttattagac gcaaccatgc agcagcattc gccggatgct
481 tcattgaaac catttctaca taatttggtt cacaccgcgg acttagcaga aattggccaa
541 agaattttaa cagcaactga attgaaagtt gcagctccat gggtattgtc tatgcttgca
601 tctttacatt ggagaatagc gggaaaacct cgtttagcct tggattgcct tcaattagca
661 ttggaaagtg ttccaaaaga atttaaagat gtaccattag ttagcatagc ttccatacac
721 cataaagtag gtttaattga cgatgcttta aaaattacgg acaaagcctt acggattaat
781 gctgtggagc caatgactaa ttttttattt ggtatattgc tgaatataaa aggaaattac
841 acaggagcta tacattattt gaaacaagca ttaagggtgg attcacattt atatgacggt
901 agggcattaa tgttattgaa aacgttagcc tgtcgtgaaa aatttaatgt tgtcacaggt
961 aattatccag ttggttaatt tagttcactg ttgatggtac tgtgttctaa aaacacagat
1021 tattgtgatg aataatgaca aacattgtca taatcacagg ctgtgaagaa caaagaatta
1081 atttacacac aaaacactct acgaacctac cttctgtatt aattactaag tataatttgc
1141 aagcgagtga cacatttctg cgtaaacgac aagtcaagaa ttgtaaacat attaactacg
1201 tttcgacaaa gacagaagaa acaggtgcgt attttcgcac atagatctta aaagtagatt
1261 ctgttttaga ctgtgttatg tactttttat ttgacactac tctgaattta cgttttattt
1321 ttgcttgaag ttagcaaaac gtaataattt tggcttacag ttatgcattt taagttgtca
1381 gaatcttgtc ttgttatatg tgctgttttt tttcttatgt aatagtatat aataaagatt
1441 attgttattt aaaaaaaaaa aaaaaa
//