LOCUS LJ590214 2093 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58925.graph_c0_seq2.
ACCESSION LJ590214
VERSION LJ590214.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2093)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2093
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58925.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 699 a 352 c 397 g 645 t
ORIGIN
1 aatacttcct ggatatactt gaatctagca tcgatttatt ggcggatcag gggaaacgct
61 tataatgctt tagagtgcag tcgtagagcg attgtacgcg ctccaaggca atatcgcgat
121 attcctcttc tgactaccgc cggcatttta cacgctgcga gatattccgg cgaggctgca
181 attattttac acgcagcaat agatcataat ccaacagaga gtcatcatca tctggcgctg
241 ggccacattt acacatctct tggcgacttc gatcgatctg cagcgtgcta tgataactgt
301 ttgagattgg cacccgacac attagaggcc aaacagatga aatatgccat attatgtcat
361 cgtttcttgg aaacgtcttt gttattattc gatcagcgtt tacgaaacgt gttatcagaa
421 atacatgcgt atcatgactg gaaggaggaa tggttcaagc tctacgagca tatgctctgg
481 gagcaaaata ttaaatctac taccagggaa attaagcttg cctttgcccg agaacaaaat
541 ctagatttac ttgcgataaa tccagttgaa aggtcaattc atcatatcga taataacatt
601 gtattatctt acgtggattt aggagatagg aaaaaagtag ctgagaacat gctgcagaat
661 gtacatgtta gtcttcacct attgaaaaat ctgcagaaac tagaaaagga acgcagtaat
721 cttatcacaa aagatatgat gacggaatta aatgttgagt acaataattt atttgtctcg
781 ccaacaaaga gtccaaaata tcacaatgta gaaattaaaa aaggaaatga agattttgaa
841 gcagaccatt ggccaaagat atcagactgt gatagttcta tgctaatgtt tggagatgga
901 aagcaatatt tacctattta tttagcgcct gaaaacaaag gttacgcgac acatttgttt
961 gtaaatgaat tgattgatat agaaccatgg aaaaagcatc cattaccatg gcatccaccg
1021 atatgccaat catctaaatc gtttaatgag cgttatatta cacatacgtt attagacgca
1081 accatgcagc agcattcgcc ggatgcttca ttgaaaccat ttctacataa tttggttcac
1141 accgcggact tagcagaaat tggccaaaga attttaacag caactgaatt gaaagttgca
1201 gctccatggg tattgtctat gcttgcatct ttacattgga gaatagcggg aaaacctcgt
1261 ttagccttgg attgccttca attagcattg gaaagtgttc caaaagaatt taaagatgta
1321 ccattagtta gcatagcttc catacaccat aaagtaggtt taattgacga tgctttaaaa
1381 attacggaca aagccttacg gattaatgct gtggagccaa tgactaattt tttatttggt
1441 atattgctga atataaaagg aaattacaca ggagctatac attatttgaa acaagcatta
1501 agggtggatt cacatttata tgacggtagg gcattaatgt tattgaaaac gttagcctgt
1561 cgtgaaaaat ttaatgttgt cacaggtaat tatccagttg gttaatttag ttcactgttg
1621 atggtactgt gttctaaaaa cacagattat tgtgatgaat aatgacaaac attgtcataa
1681 tcacaggctg tgaagaacaa agaattaatt tacacacaaa acactctacg aacctacctt
1741 ctgtattaat tactaagtat aatttgcaag cgagtgacac atttctgcgt aaacgacaag
1801 tcaagaattg taaacatatt aactacgttt cgacaaagac agaagaaaca ggtgcgtatt
1861 ttcgcacata gatcttaaaa gtagattctg ttttagactg tgttatgtac tttttatttg
1921 acactactct gaatttacgt tttatttttg cttgaagtta gcaaaacgta ataattttgg
1981 cttacagtta tgcattttaa gttgtcagaa tcttgtcttg ttatatgtgc tgtttttttt
2041 cttatgtaat agtatataat aaagattatt gttatttaaa aaaaaaaaaa aaa
//