LOCUS LJ590088 1782 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58437.graph_c0_seq1.
ACCESSION LJ590088
VERSION LJ590088.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1782)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1782
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58437.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 649 a 326 c 282 g 525 t
ORIGIN
1 aacagcagca acagcagcag caagcaatga tgtcgatgca aagttatgcg cagagtaccg
61 cgccgccacc gccgcctcca aataacgctc cgatgcgcac caatcttatc actgtgccga
121 tccaagatac ggcgtctcta actacgcacg atcttcatgc tcaacaaagt catcattatt
181 attcggcgcc accaccaccg cctccgccgc caccaccgcc agtgaattat ggtggttata
241 atgtgccacc gccggtgtcg caacagacgc aacaatacta tccacagccg cagcatccga
301 ctcaggtatc gtacgtgccg ccaccgcctc caccgcagca gcaacagtac gtatcgtcgg
361 ctccgacctc catacgacca tcacctaccg gttatataca agaacctcaa tatggtccgc
421 caccgtctca gcaacaacca ccaccgccac cacagccaca gtggtcacaa catcaacaac
481 agttttatag ataaaaagac gagtgttatt aattcagtga taacgaacga cgtgaaagat
541 gtaagtttga ttctcgatcc tcttacttca taaatatttc taaatggaga aagattttcc
601 cactgtgaga taaaaaataa gtttaaaaaa agtaaatcca aaattattta atttgaatct
661 gttaattctg cgctcctcta aagggatttg ttagccctag taaactagaa aaaaaaagaa
721 aatatgtata tattgattgt cataaatgtt tattggggct aaatttaata aatccctgta
781 tgaacaaaaa tttaaatatt ataatatata tgtaattgcc taatattttt ataatgtaga
841 ttaattcaga taacagtaaa tattaaagta tggaaataat attctattta ctatcaagcg
901 cgtatatgtg tatatataga atatcagtta tttttgtatt tcaatatcgt tgttatctga
961 attcacatta taaatatatt acaaaataaa aatgtttttt acattggagc atattgtata
1021 aacgtttaaa gtgtaaagtt aaaactgcaa ttacgtttaa tcctttatgg cacatttttt
1081 ttatcagtcc aatttcaatg gaattttata cggaaaaata ggagattttt ggggtcacta
1141 atttcggggt cactaatcca aaattcaaat ttgaaaatta aaaatttcaa gatatgaaaa
1201 aatataaaaa tatataaaga atttataaaa atgtaaaaca cagagaaatg tgacatatga
1261 gtatgtcatt ataatatcgc aaggggttaa aagacataaa atttcaagaa tctacaaatt
1321 ttttataaat accgaaatct aatcgtaata tcatatacgg agtgtccatt atatacgggg
1381 tatataattt ttaaagccta tccttatagg gattaagaaa aaatgaaggg atagttttat
1441 tcagagaaca gaggtgacag tgatttcttc ccggagtcct agcttatttt cagccaagat
1501 catattgtat ggcgaagaac tacgagaagt gactattggc gcagaacagt atgaatctag
1561 atcggaagat taataaatat tttacgccta agagggtttc tagggaaacc taacttaaaa
1621 atttcaaatg aaattctcca tattataata tatattgtca aacggacaga aaaagaaaat
1681 ttttgactca acataaaaat tgatatgttg atccattcag aaattattta aaatcaaagt
1741 tcgaaaaaca tcaagtttcc aattttaaat ccttttcatt ta
//