LOCUS LJ589824 1509 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58893.graph_c0_seq16.
ACCESSION LJ589824
VERSION LJ589824.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1509)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1509
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58893.graph_c0_seq16"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 545 a 226 c 271 g 467 t
ORIGIN
1 cgcagagtac atggggagag catgtgacgt cattaactca actcgggtta ggttaaaatt
61 tattacactc gaaaacgcta aaaagaaaac tttgttttta aattatttag ttttaccatc
121 tattgttgct ccaatctaag tgatgaggtg acaaaattct taataagaaa atggcttgca
181 gtgattctat gataacagtc tcctgggaat tgttaacaaa agaattgaaa aatataccta
241 ttgaaataaa actacacttg acatcaataa tcaacatact acaaacatct gacaaacaat
301 taacttcaga aaagtggata aatgcttcaa taacaagagt ggaagcttgt ttagaccgca
361 catgggaggt attgaattca ggctactgga aagatgtctc aatagaatac agatattgtt
421 attctctatg tgttattgta aaggctgtat tattagaact tcagtataaa ataaatgctg
481 aaagttgtgc tgataaagag aagaaaaaga ctgtattgaa gaatattatt aaccaaattg
541 atagaggcat tttgttaggc gcacctcttc ccagtatgcc aaatttatta acagctattg
601 ccacgaagtt aaataactgt tatgctgaag aatctgatac tataaatata gaagatattt
661 caattaatca tgaaaggact gactacttaa tttctaattg cccggataga tattttgaaa
721 aaccttcaat gcaaacattt tacaataaaa tttttatgcc aaagttacca gctgtattaa
781 cagagtgtat aactcactgg aaagcgttaa cattatggaa gaattctaat tatttgaata
841 aagttgcggg atctcggaca gtacctattg aaattggatc ccgttatact gaagaagatt
901 ggacacagaa tcttgttaat ttttctgaat ttttacaaaa gcacgttatt gcaagtaaca
961 gtgaagttgg gtatttagca caacatcaat tattcgaaca gataccagaa ttgaaagagg
1021 attttgaagt accagagtat tgttgctttt cggatagcga agagaatgat gcagaatcat
1081 cagaagttga tataaacgct tggtttggac ccgctaatac agtgtcgcct ttgcattttg
1141 atccaaaaaa caatctgctt tctcaggtat ttggttacaa aagagttatc ttgtattctc
1201 caaccgaaac tgataagtta tatccttatg acagtagatt acttaacaat actgcgcaag
1261 tagatcctat aaggccagat tacgacaagt ggccgaattt tcgtgaagcc aatggcatga
1321 cggtttactt aaagcccgga gaaatgttgt atattccacc aaaatggtgg catcatgtaa
1381 ccgctcttac tccgagtttt tcgatcagtt tctggtggaa ttaatgttta ttttgaatat
1441 aaatatgcaa tacaatttac aaatggatta aataaaaatt gtttgttaaa gttaaaaaaa
1501 aaaaaaaaa
//