LOCUS LJ589820 2493 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58893.graph_c0_seq12.
ACCESSION LJ589820
VERSION LJ589820.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2493)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2493
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58893.graph_c0_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 885 a 362 c 424 g 822 t
ORIGIN
1 cgcagagtac atggggagag catgtgacgt cattaactca actcgggtta ggttaaaatt
61 tattacactc gaaaacgcta aaaagaaaac tttgttttta aattatttag ttttaccatc
121 tattgttgct ccaatctaag tgatgaggtg acaaaattct taataaggta tcagaagtaa
181 aagatgtatg caaaatgctt catcttcttt gcgcttgctt gtatattgat acttgcaaga
241 gcatgttatc tgatattcat caaaagtaat aagcccagag aaaaaccttg tcctgttaaa
301 acaatgataa tattaggatc cggtgggcac acggccgaaa tgctgcgaat tgttaaacac
361 ttgaacatta agaattattc acctagagtt tacattcatg ctcgtacaga taaacttagc
421 gcagaaaaag ttagggaact agagagtggc aacacagatc acaaaattgt ggaaatttac
481 agaagtcgag aagttcggca gtcgtacttt acgtcaattt ggactactgt acttgccaca
541 ctaaattgtc ttccaatgtt atggagagaa aagccagaac tcattttatg caatggtcct
601 ggcacttgtg tacctttatg tgtcatagca tttttattta aaatcttatt tattacagaa
661 aacgttattg tattcataga aagtttctgt agagttaaaa ctttctcgtt aacaggaaaa
721 atcttgtatt acttagctga tcatgttatt gtgcgatggg cgtacttaac taaacctatg
781 tatagcagaa gcatttgttt ataagtaaat actttcaatt atattttata ttgtcataat
841 tgtatacctg aaataattta cagaaaatgg cttgcagtga ttctatgata acagtctcct
901 gggaattgtt aacaaaagaa ttgaaaaata tacctattga aataaaacta cacttgacat
961 caataatcaa catactacaa acatctgaca aacaattgta aatattgaat tgtaaatatt
1021 atttatgagc actgttattt tctatatatt taccacaata ttaaagcttt gtattttgtt
1081 aaatcagtgt aaaagtacac cacaatataa tcttatttat ttaaattggt aaaattaaag
1141 tttgtataaa atcatgtaac tattaaaata gtattttcat atcttgttta cgagatttat
1201 tattttataa aaacaattag tatgtacata taatattcaa cctaaatctt caatgtataa
1261 ttgtaagttt tgtttttctt ataagaactt cagaaaagtg gataaatgct tcaataacaa
1321 gagtggaagc ttgtttagac cgcacatggg aggtattgaa ttcaggctac tggaaagatg
1381 tctcaataga atacagatat tgttattctc tatgtgttat tgtaaaggct gtattattag
1441 aacttcagta taaaataaat gctgaaagtt gtgctgataa agagaagaaa aagactgtat
1501 tgaagaatat tattaaccaa attgatagag gcattttgtt aggcgcacct cttcccagta
1561 tgccaaattt attaacagct attgccacga agttaaataa ctgttatgct gaagaatctg
1621 atactataaa tatagaagat atttcaatta atcatgaaag gactgactac ttaatttcta
1681 attgcccgga tagatatttt gaaaaacctt caatgcaaac attttacaat aaaattttta
1741 tgccaaagtt accagctgta ttaacagagt gtataactca ctggaaagcg ttaacattat
1801 ggaagaattc taattatttg aataaagttg cgggatctcg gacagtacct attgaaattg
1861 gatcccgtta tactgaagaa gattggacac agaatcttgt taatttttct gaatttttac
1921 aaaagcacgt tattgcaagt aacagtgaag ttgggtattt agcacaacat caattattcg
1981 aacagatacc agaattgaaa gaggattttg aagtaccaga gtattgttgc ttttcggata
2041 gcgaagagaa tgatgcagaa tcatcagaag ttgatataaa cgcttggttt ggacccgcta
2101 atacagtgtc gcctttgcat tttgatccaa aaaacaatct gctttctcag gtatttggtt
2161 acaaaagagt tatcttgtat tctccaaccg aaactgataa gttatatcct tatgacagta
2221 gattacttaa caatactgcg caagtagatc ctataaggcc agattacgac aagtggccga
2281 attttcgtga agccaatggc atgacggttt acttaaagcc cggagaaatg ttgtatattc
2341 caccaaaatg gtggcatcat gtaaccgctc ttactccgag tttttcgatc agtttctggt
2401 ggaattaatg tttattttga atataaatat gcaatacaat ttacaaatgg attaaataaa
2461 aattgtttgt taaagttaaa aaaaaaaaaa aaa
//