LOCUS LJ589818 1797 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58893.graph_c0_seq10.
ACCESSION LJ589818
VERSION LJ589818.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1797)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1797
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58893.graph_c0_seq10"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 653 a 252 c 299 g 593 t
ORIGIN
1 cgcagagtac atggggagag catgtgacgt cattaactca actcgggtta ggttaaaatt
61 tattacactc gaaaacgcta aaaagaaaac tttgttttta aattatttag ttttaccatc
121 tattgttgct ccaatctaag tgatgaggtg acaaaattct taataagaaa atggcttgca
181 gtgattctat gataacagtc tcctgggaat tgttaacaaa agaattgaaa aatataccta
241 ttgaaataaa actacacttg acatcaataa tcaacatact acaaacatct gacaaacaat
301 tgtaaatatt gaattgtaaa tattatttat gagcactgtt attttctata tatttaccac
361 aatattaaag ctttgtattt tgttaaatca gtgtaaaagt acaccacaat ataatcttat
421 ttatttaaat tggtaaaatt aaagtttgta taaaatcatg taactattaa aatagtattt
481 tcatatcttg tttacgagat ttattatttt ataaaaacaa ttagtatgta catataatat
541 tcaacctaaa tcttcaatgt ataattgtaa gttttgtttt tcttataaga acttcagaaa
601 agtggataaa tgcttcaata acaagagtgg aagcttgttt agaccgcaca tgggaggtat
661 tgaattcagg ctactggaaa gatgtctcaa tagaatacag atattgttat tctctatgtg
721 ttattgtaaa ggctgtatta ttagaacttc agtataaaat aaatgctgaa agttgtgctg
781 ataaagagaa gaaaaagact gtattgaaga atattattaa ccaaattgat agaggcattt
841 tgttaggcgc acctcttccc agtatgccaa atttattaac agctattgcc acgaagttaa
901 ataactgtta tgctgaagaa tctgatacta taaatataga agatatttca attaatcatg
961 aaaggactga ctacttaatt tctaattgcc cggatagata ttttgaaaaa ccttcaatgc
1021 aaacatttta caataaaatt tttatgccaa agttaccagc tgtattaaca gagtgtataa
1081 ctcactggaa agcgttaaca ttatggaaga attctaatta tttgaataaa gttgcgggat
1141 ctcggacagt acctattgaa attggatccc gttatactga agaagattgg acacagaatc
1201 ttgttaattt ttctgaattt ttacaaaagc acgttattgc aagtaacagt gaagttgggt
1261 atttagcaca acatcaatta ttcgaacaga taccagaatt gaaagaggat tttgaagtac
1321 cagagtattg ttgcttttcg gatagcgaag agaatgatgc agaatcatca gaagttgata
1381 taaacgcttg gtttggaccc gctaatacag tgtcgccttt gcattttgat ccaaaaaaca
1441 atctgctttc tcaggtattt ggttacaaaa gagttatctt gtattctcca accgaaactg
1501 ataagttata tccttatgac agtagattac ttaacaatac tgcgcaagta gatcctataa
1561 ggccagatta cgacaagtgg ccgaattttc gtgaagccaa tggcatgacg gtttacttaa
1621 agcccggaga aatgttgtat attccaccaa aatggtggca tcatgtaacc gctcttactc
1681 cgagtttttc gatcagtttc tggtggaatt aatgtttatt ttgaatataa atatgcaata
1741 caatttacaa atggattaaa taaaaattgt ttgttaaagt taaaaaaaaa aaaaaaa
//