LOCUS LJ589814 1445 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58893.graph_c0_seq6.
ACCESSION LJ589814
VERSION LJ589814.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1445)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1445
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58893.graph_c0_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 541 a 197 c 222 g 485 t
ORIGIN
1 gaatctaagg tagtataaaa agtacaaaaa aaaatacgaa aagtttaaag attaaaaaaa
61 aactatttac aaaaattcta tttacctaac ctgcaatctc ttgctttttc agtgatgagg
121 tgacaaaatt cttaataagg tatcagaagt aaaagatgta tgcaaaatgc ttcatcttct
181 ttgcgcttgc ttgtatattg atacttgcaa gagcatgtta tctgatattc atcaaaagta
241 ataagcccag agaaaaacct tgtcctgtta aaacaatgat aatattagga tccggtgggc
301 acacggccga aatgctgcga attgttaaac acttgaacat taagaattat tcacctagag
361 tttacattca tgctcgtaca gataaactta gcgcagaaaa agttagggaa ctagagagtg
421 gcaacacaga tcacaaaatt gtggaaattt acagaagtcg agaagttcgg cagtcgtact
481 ttacgtcaat ttggactact gtacttgcca cactaaattg tcttccaatg ttatggagag
541 aaaagccaga actcatttta tgcaatggtc ctggcacttg tgtaccttta tgtgtcatag
601 catttttatt taaaatctta tttattacag aaaacgttat tgtattcata gaaagtttct
661 gtagagttaa aactttctcg ttaacaggaa aaatcttgta ttacttagct gatcatgtta
721 ttgtgcgatg ggcgtactta actaaaccta tgtatagcag aagcatttgt ttataagtaa
781 atactttcaa ttatatttta tattgtcata attgtatacc tgaaataatt tacagaaaat
841 ggcttgcagt gattctatga taacagtctc ctgggaattg ttaacaaaag aattgaaaaa
901 tatacctatt gaaataaaac tacacttgac atcaataatc aacatactac aaacatctga
961 caaacaattg taaatattga attgtaaata ttatttatga gcactgttat tttctatata
1021 tttaccacaa tattaaagct ttgtattttg ttaaatcagt gtaaaagtac accacaatat
1081 aatcttattt atttaaattg gtaaaattaa agtttgtata aaatcatgta actattaaaa
1141 tagtattttc atatcttgtt tacgagattt attattttat aaaaacaatt agtatgtaca
1201 tataatattc aacctaaatc ttcaatgtat aattgtaagt tttgtttttc ttataagaac
1261 ttcagaaaag tggataaatg cttcaataac aagagtggaa gcttgtttag accgcacatg
1321 ggaggtattg aattcaggct actggaaaga tgtctcaata gaatacagat attgttattc
1381 tctatgtgtt attgtaaagg tacaaaataa attgttgtat acagtctaaa aaaaaaaaaa
1441 aaaaa
//